Gene Tneu_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1560 
Symbol 
ID6165372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1383950 
End bp1385197 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content58% 
IMG OID641668718 
ProducttRNA CCA-pyrophosphorylase 
Protein accessionYP_001794930 
Protein GI171186011 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) 
TIGRFAM ID[TIGR03671] CCA-adding enzyme 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG TCGAGGAGGT GCTCAAGGAG GCCTACAAGT TGGTCACGCC AACTCCGGAG 
GAAGAGAGGA AGGTCGCCGA GGTCGGGTCG AGAGTTAGGC AGTGGGTGTC GGAGGCCCTC
GCCGGAGTCG CAGCCGAGGT GGACATGTAC GGCTCAAGCG CTAGGTCGAC GTGGCTACCT
GGCCAACGCG ACATAGATAT CTTCGTTGTT CTACGTGACA GATCCATCAA GCCCGAGGAT
GTGGTCCAGA CGCTTTCTAG GTATTTCGAC GGCGTTGGTG TACCGTGGAG CTTGAGGTAC
GCCCAACATC CCTACCTGTC GCTGTATGTG GAGGGGTACG AAGTGGACGT TGTGCCGTGC
TACAAGATCG CGCCGGGGGA GCGGCCCATC ACTGCGGCGG ATAGATCGCC GCTACACCAC
AAGTTCCTGT CGGAGAGGCT GTCGGAGGAT CAGAGACGCG ACGTGAGGCT GCTAAAGCTT
TTCCTCAAAT CGATTGGGGT ATACGGGGCC GAGATCAAGG TCGAGGGTTT CTCCGGCTAC
TTGACGGAGC TTCTGGTGGC CTACTACGGC TCCTTCGTCG ACGTGTTAAA GGCGGCGTCG
GGCTGGAGGC CGTACAGGAC GTACATATCC TTTACCGAGT CTAAGACGAA GTTCAAGGCC
CCCCTAGTCG TCGTCGACCC GGTTGACCCA AACAGGAACG TGGCGGCGGC GGTGTCGTTG
ACGTCGATGT CCACCTTTGT GCTCGCCTCA AGACGTTTCC TAAAGAAGCC ATCGCTCTCG
TACTTCTCGC CGCCTGAAGC CCCCGCGTTA GGGGTAAACG CCGTAGAGGT CGTGTTTCCC
TACCCCGGCG AATCGCCGGA TGTGGTTTGG GGCCGCTATA AGCGGCTTGG AAAATCGCTG
TATAAGCACC TGAGGGAGTG CGGCTTCAAG ATCTACCGCT GGGGCGTCGA AAGCGACGAG
AAAACCTACG TGTCCATCAT ATACGTGGTT GAGGATGTGG AGCTACCGCC TTATGTCCTC
CACAGAGGGC CTCCGGTGTA TGACAACGCC ATCGACGCGT TTGTGGAGAA GTATCTCCGG
GAGGAGGTGG TGGGGCCCTT TGTCCTAGGC ACAAGAGCCT ACGTGATCAA GAGGAGGCGT
TACACCAACA TAGGTGATTG CATAAGGGCT AAATTAGGCG GCGGCTACGC CATAAGGATA
AACCAATACG GCGGAGGTTT AGTACGAAAA ACCCCATGGC TCACCTAG
 
Protein sequence
MSEVEEVLKE AYKLVTPTPE EERKVAEVGS RVRQWVSEAL AGVAAEVDMY GSSARSTWLP 
GQRDIDIFVV LRDRSIKPED VVQTLSRYFD GVGVPWSLRY AQHPYLSLYV EGYEVDVVPC
YKIAPGERPI TAADRSPLHH KFLSERLSED QRRDVRLLKL FLKSIGVYGA EIKVEGFSGY
LTELLVAYYG SFVDVLKAAS GWRPYRTYIS FTESKTKFKA PLVVVDPVDP NRNVAAAVSL
TSMSTFVLAS RRFLKKPSLS YFSPPEAPAL GVNAVEVVFP YPGESPDVVW GRYKRLGKSL
YKHLRECGFK IYRWGVESDE KTYVSIIYVV EDVELPPYVL HRGPPVYDNA IDAFVEKYLR
EEVVGPFVLG TRAYVIKRRR YTNIGDCIRA KLGGGYAIRI NQYGGGLVRK TPWLT