Gene Tneu_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1556 
Symbol 
ID6165212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1380624 
End bp1381559 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content57% 
IMG OID641668714 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001794926 
Protein GI171186007 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCC TAATGTCGGC CCTTGTGGCA GACAGCGTAG ACCCGTTAAT TAGGGAGCGG 
CTCGAGAGAC GCGGAATAAG GGTGGATATG CGGCCGGGCA TCAGCAGAGA AGAGCTCCTA
TCTATCATAA AGAACTACAA TATCTTGATT TTCAGAGGCA GGCTGAAGAT AGACAGAGAG
GTGATAGACG CAGGTACAAA CCTGAAGATC CTCGCGAGAT ACGGCGTAGG GCTTGACAAC
GTGGACGTGG AGTACGCGGT TAAGAGAGGT CTCGTCGTAG TCTCAGCGCC GAATGCGCCA
ACCCAAAGCG TCGCCGAGCT CACAATAGGT CTCATGTTGG CGGTTGCCCG GAGGATCCCG
CTACTCAGCG GAAAGGTGAA AGGCGGAGAG TGGCCCAAGG GGAGGTACGT GGGGGTTGAG
CTGGGAGGCA AAACCCTCGG CGTTGTGGGA TTCGGCAGAA TCGGCAGAGC GGTGGCGCAT
ATAGCGCGAG GCCTCGGCAT GAGGATAGTG GCAAGCGACG TGATAGACGT AAGCTCTGAG
GTGGAAAAAC TCGGGGGCCG ACAGCTTCCT CTTGAGGAGC TCCTCAAGAC CAGCGACGTG
GTTACCGTCC ACGTCCCCCT AACCCCCAAC ACCTATAAGC TGATAAACGC CGACAGGATC
GCGTTGTTGA AAGACGGCGC GATCTTCGTG AACACGAGCA GAGGCGAGGT TGTTGACTAC
GAGGCCCTAT ACCGCCACAT CGACAGGCTA TGGGGTGTGG GGTTGGACGT TCTCCCAGAG
GAACCCCCCA AAAGCCCCTA CCTAAGGGAG CTGGTGGCGC ATGAAAAGGT GGTGGTGACT
CCACACGTGG GCTCTGAGAC GTATGAGGCC ATGAGGAGAC TCGCCGAGGA GCTAGCCCTC
AACATAGAAG AGGTAATCTC GAGGATCAAG CTATGA
 
Protein sequence
MGALMSALVA DSVDPLIRER LERRGIRVDM RPGISREELL SIIKNYNILI FRGRLKIDRE 
VIDAGTNLKI LARYGVGLDN VDVEYAVKRG LVVVSAPNAP TQSVAELTIG LMLAVARRIP
LLSGKVKGGE WPKGRYVGVE LGGKTLGVVG FGRIGRAVAH IARGLGMRIV ASDVIDVSSE
VEKLGGRQLP LEELLKTSDV VTVHVPLTPN TYKLINADRI ALLKDGAIFV NTSRGEVVDY
EALYRHIDRL WGVGLDVLPE EPPKSPYLRE LVAHEKVVVT PHVGSETYEA MRRLAEELAL
NIEEVISRIK L