Gene Tneu_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1534 
Symbol 
ID6166210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1364719 
End bp1365711 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content56% 
IMG OID641668692 
ProducteRF1 domain-containing 1 protein 
Protein accessionYP_001794904 
Protein GI171185985 
COG category[R] General function prediction only 
COG ID[COG1537] Predicted RNA-binding proteins 
TIGRFAM ID[TIGR00111] probable translation factor pelota 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATATG AAATTGACGC CAAGCGCAGA ACCGTAAGGG TTGTGCCCGA GAGGGAGGAG 
GACCTCTACT TCGTATATCT GCTCGTGGAG AGAGGCGACG TAGTCCGGGG CTGGACAGTT
AGGGAGTACA AGCCAGAGGG GGCCAAGGAG GGCGAGCGGG TGAAGATGTA CCTCGCCGTC
AGGGTGGAGT CGCTGGAGTA CCACAAGTTC CGTGGTAGCC TGAGGATTAG AGGACCAGTC
GTGGAGGTTC AAGAGGGGGT GGAGGGCGTC AAGGGCAGGA GGCACACCTT CGACGTCGTC
CCGGGGAGAG AGATAGAGAT AGAGAAGGCG GCGGAGTTTC CGCTAGATGT AGTGGAGGAG
ATCCTCAAAA TGGCGCAAGC GTTGATGCCC AAGGTGCTAC TGGTATCTAT CGACGACGAA
GAGGCCGCCT TCGCGTATAT AACAGCCTTA GGCGTGGAGC TCATCCAAGT GGTACATAAC
GCTAGCAAGG GAGAAGAAAG CTTGTTCGAT GGATATTTGG AATCTGTAAG AAAGCAGGTG
GACGAGCTCT CCAGGAGGTT AAAGCCAGAC AAGTTGGTAG TCGCCGGGCC CGCCATGTTG
GTAGAACACA TAGCTAGATA CATACGCGGC GATAAGGCCC CACAGGGCTC CGGCGGCCTC
GCTGGGGTAT ACGAGTTCAT ACGCAGCGGC CTATACGACG AGTTGAAAAC TCAGATGGGG
GTCAAGGCGT ATGAGAAACT AATCCACATG GCGGCCACAA GCCGCGAGTC GGTGGCTATC
GGCCCGCAGG AGGTTGAAGA GGCCGCCTCT CTAGGCCGCG TGGATTTCGT ACTGGTTCTA
GACAGCTACA TAAAGGAGAG CCCGGAGAAG GCTTGGGTCC TCTTGTCGCA GATATATAAA
ACGAAGGGGC GAATCTATAT AGTAAGAGAG GATACGGAAG TGGGCGCCGG CATAAGGGCT
ATGGGAGGAA TAGCGGCCGT ATTGAGGTGG TAA
 
Protein sequence
MKYEIDAKRR TVRVVPEREE DLYFVYLLVE RGDVVRGWTV REYKPEGAKE GERVKMYLAV 
RVESLEYHKF RGSLRIRGPV VEVQEGVEGV KGRRHTFDVV PGREIEIEKA AEFPLDVVEE
ILKMAQALMP KVLLVSIDDE EAAFAYITAL GVELIQVVHN ASKGEESLFD GYLESVRKQV
DELSRRLKPD KLVVAGPAML VEHIARYIRG DKAPQGSGGL AGVYEFIRSG LYDELKTQMG
VKAYEKLIHM AATSRESVAI GPQEVEEAAS LGRVDFVLVL DSYIKESPEK AWVLLSQIYK
TKGRIYIVRE DTEVGAGIRA MGGIAAVLRW