| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1517 |
|---|
| Symbol | |
|---|
| ID | 6166046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1350603 |
|---|
| End bp | 1351838 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641668675 |
|---|
| Product | putative pseudouridylate synthase |
|---|
| Protein accession | YP_001794887 |
|---|
| Protein GI | 171185968 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1258] Predicted pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGTCC TAGAGAGATC TATGGAGATA TTGAGGGCGT ACCCGCTATG CGACTCCTGC
CTCGGAAGAC TCTTCGCCCA ACTGGGCTAC GCCTTGGAGA ACGCAGAAAG GGGATCGGCG
ATTAAGACAT TGCTACATAT GAAGCTCGTT ACGGAGTATA GGCAGGGGGC AGACGTGTCG
GGGGATCTAA AGAGCCTAGC CCGCGTCCAC AGGCCGACTC GGCGGTTTCT CGCCAGCGTT
GGGGTAGCCG TAGAGGATTC TCAGTGCTAC ATATGTGGCG GTCTCACGTC TTCCGTCGAG
CGCTACGCCA AAGACGCCGT AGTTCAACTC TCCGGCGTCG ATTTCGAGAC CTTTGCCGTT
GGGACAACTC TACCTAGGGA GGTGCTGGAG AGGGAGTCCG AGGTGGTAAA GAGGTTCCTC
ATCTCCACAG GCGAGTCGAT CAAGCACGAA ATAAACCGTA GAATAGGGAG GGAGATCCTT
AAACTGTTGC CCGGTAAGAA GGTGGATAAG CAGAGGCCCA ACGTGTTGGT AAGGATAGAC
CTAGTGACCG GTAAGGTGGA CGTGGTAAGG AACCCCCTCC TCATAGAGGG GGTCTACCTC
AAGCTGAGCA GAAGAGTCTC TCAGGCAAAA AAATTCGGCG ATGTCAAAGC CTCACTGCTG
GAGAAGCTGG CGCACGTCCG GGATTTATAC GGCGGCGTAG AACACCTAAT CCACGTCTCC
GGCAGAGAAG ACAGCGACGC CAGGATGTTG GGTCCAGGCA GACCCCTCGT TATAGAGGTG
AAGAATCCAA GTAGATACCG AGGTTTACCC GGGAGATATG AAGACGGGGA CGTGATCTAT
ATCCCACGCG GCTTTACGGT AAGGGAGGAG ATAAGGAGGT TGAAAGATAA GGCTAAAACC
GACATAAAAC TCTACCGCGC GCTTGTCTAT TCTGAGAATC CGCTTACCGA GACCGACTTG
GCTAAACTCG GCGAGCTTAC GGGTAAGACG ATCCTGCAGT ACACCCCACG TAGGATCAAA
CGCCTCAGTC CCAGGAAGAG GAGGACCCGC ATGGTCTACG AGCTGGCGTG GCGCCTAGTA
TCCCCCCACG TATTTGAGCT CTACATCAGG TGCCAAGGCG GCCTTTACGT AAAAGAGTTC
ATCCACGGCG ACGGCGGTCG GACAACCCCA AGCGTGGCTG AGATTTTAAA CACGTACTTA
GAGGTTCTCG AGCTAGATGT GCTGTCTATA GAATAG
|
|---|
| Protein sequence | MDVLERSMEI LRAYPLCDSC LGRLFAQLGY ALENAERGSA IKTLLHMKLV TEYRQGADVS
GDLKSLARVH RPTRRFLASV GVAVEDSQCY ICGGLTSSVE RYAKDAVVQL SGVDFETFAV
GTTLPREVLE RESEVVKRFL ISTGESIKHE INRRIGREIL KLLPGKKVDK QRPNVLVRID
LVTGKVDVVR NPLLIEGVYL KLSRRVSQAK KFGDVKASLL EKLAHVRDLY GGVEHLIHVS
GREDSDARML GPGRPLVIEV KNPSRYRGLP GRYEDGDVIY IPRGFTVREE IRRLKDKAKT
DIKLYRALVY SENPLTETDL AKLGELTGKT ILQYTPRRIK RLSPRKRRTR MVYELAWRLV
SPHVFELYIR CQGGLYVKEF IHGDGGRTTP SVAEILNTYL EVLELDVLSI E
|
|---|
| |