| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1511 |
|---|
| Symbol | |
|---|
| ID | 6165642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1343937 |
|---|
| End bp | 1344359 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641668668 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001794881 |
|---|
| Protein GI | 171185962 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01295] bacteriocin transport accessory protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00655361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACG TGGAGAGGCT CTTGTGGAAA AAGGCGGTAG AGCTGACGAG CAGAAAAACG
CCGCAGTGTT GCAACGTCAG CTACGCGCCT GGACAGGTGC TCTACGGCGT TGACCAGCTC
AGAAACGCGG TGGCCAGCTG CAAGACGGCC TTTGTTATGT TCTTCGGGAA GATGTGCCCC
TACTGCCAGA TGTTCGACCC GATTTTTAGG CAGGTGGGGG AGAGGTACCG GGCCTACGCC
AACTTCGTGA AAGCAGACGT TGAGGTGTTT TTCGACCTGG CGGCTAGGTT AGGCGTGATG
GGCACCCCCA CCACAGTTGC CTTCGTAGAG GGGAGGCCTC TAGACGCCGT GTCTGGCTTC
TTGACGGCGC CGCAGTTTAA GGCCTTTGTG GAGTCCGTCC TGTCGAGGGC CGGCTGTAGA
TAA
|
|---|
| Protein sequence | MDDVERLLWK KAVELTSRKT PQCCNVSYAP GQVLYGVDQL RNAVASCKTA FVMFFGKMCP
YCQMFDPIFR QVGERYRAYA NFVKADVEVF FDLAARLGVM GTPTTVAFVE GRPLDAVSGF
LTAPQFKAFV ESVLSRAGCR
|
|---|
| |