Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1509 |
Symbol | |
ID | 6165777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1341588 |
End bp | 1342514 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641668666 |
Product | malate dehydrogenase |
Protein accession | YP_001794879 |
Protein GI | 171185960 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.195418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACGA TCATCGGAAG CGGCAGGGTT GGGTCCTCCG CCGCCGCGAT AATCGGGATA ATGAAGCTAG ACAACAAGAT CCTTCTAGTC GATATAGTGA AGGGCCTCCC CCAGGGCGAG GCCCTCGACT TAAACCACAT GAGCTCCATA CTGGGCTTAG ACGTGGAGTA CATGGGTTCA AACGACTACA GAGATATGGA GGGTAGCGAT CTGGTGATAG TGACAGCCGG GCTTGCCAGA AAACCCGGCA TGACCAGAGA ACAGCTACTT GAGGCCAACG CCAAAATAGT GAGCGAGATC GGAAGAGAGA TCAGGAAGTA TGCGAAAGAC TCGGTGGTGA TTCTGACGAC GAATCCTCTC GACGCGATGA CGTACGTCAT GTGGAAGGCC ACAGGCTTCC CCAGGGAGCG CGTCATTGGA TTCAGCGGAG TGCTAGACGC GGGGAGACTG GCCTACTACG CGGCGAAGAA GCTAGGCGTT TCCCCCAGCT CAATACTGCC GATTGTGCTA GGTCAACACG GCGAGAGCAT GTTCCCCGTG CCAAGCAAGA GCTTCATACA CGGCGTACCC CTAACCAGGC TTTTGACGGA GGAGCAGATT AGGGAAGTGA CTGAGGAGAC GGTAAAAGCC GGGGCTAAAA TAACCGAGCT CAGGGGCTTC TCCTCCAACT GGGCGCCCGG CGCCGGGCTC GCCGTTATGG CTGAAGCCGT TAAGCGCGAT ACGAGGAGAT CCCTCATCGC GTCCGTGGTG CTACAGGGCG AATACGGCGT TAGAGACATC CCAGTGGAGG TGCCAATCGT CCTCGGCAGA AGCGGCGTGG TTAAGGTGCT GGAGGTGGAG CTTACCCCCG GCGAGCTCCA GAGCTTCATG CAGAGCGTCG AGGCCGTCAA GAAGCTGGTG TCCTCGATAC CGCCTAACCT GCTCTAA
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Protein sequence | MITIIGSGRV GSSAAAIIGI MKLDNKILLV DIVKGLPQGE ALDLNHMSSI LGLDVEYMGS NDYRDMEGSD LVIVTAGLAR KPGMTREQLL EANAKIVSEI GREIRKYAKD SVVILTTNPL DAMTYVMWKA TGFPRERVIG FSGVLDAGRL AYYAAKKLGV SPSSILPIVL GQHGESMFPV PSKSFIHGVP LTRLLTEEQI REVTEETVKA GAKITELRGF SSNWAPGAGL AVMAEAVKRD TRRSLIASVV LQGEYGVRDI PVEVPIVLGR SGVVKVLEVE LTPGELQSFM QSVEAVKKLV SSIPPNLL
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