| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1477 |
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| Symbol | |
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| ID | 6165912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1315805 |
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| End bp | 1317004 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641668635 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001794848 |
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| Protein GI | 171185929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAA AAGCCGTGTC TCTCCTGAGC AAGCTCATCT CGATACCTAC CGTGAATCCC
CCCGGTGAGA ACTACGCCCA GTTTGTAGAC GCCGCCGAGA GGTACTTCAA ATCTCTGGGT
CTCGACACGG AGGTTTTGGA GGTCCCGAGG TCGGAGGTGG CGAGCAGATG TCCAGAGTGC
GCAGACCACC CCCGGTACAT ACTGTTGGCT AGGCTGGGGG AGCCGAAGAT ACACTTCAAC
GGCCACTACG ACGTCGTTCC TCCGGGTCCG CAGGAGAGCT GGAAAATCAC AAAGCCCTTT
GAACCCCTCT ACAGAGATGG GAGACTATAC GGCAGAGGCG CCGTGGATAT GAAGGGGGGG
ATCACGTCGA TTATGCTGGC CGTTGAGAGA GCTACGGCGG CCGGGCTGAA GAACTTCGAG
GTGTCTCTGG TGCCAGATGA GGAGATAGGC GGTGAGACGG GCGCCGGCTA CCTAGCCCGC
TCCGGCAAGG TCAAAGCGCC GTGGGTCATC ATCGCCGAGG GCTCGGGAGA GGACAACATA
TGGATCGGCC ACAGAGGCCT CGTCTGGTTC ATGGTGGAGG TCTACGGCAA GCAGACCCAC
GGCTCAACCC CCTGGCTTGG CCTAAACGCC TTCGAAGGAG CGGTCTACAT CGCGCATAGG
CTTCAGGAGT ACATAAGAGC GGTCTCCACT AGAGCCAGCA GGTACGAGTA CGACGACCCG
CGGGGGGCGA CGCCCACGGT CACAATAGGC GGCGAGGTGA GGGGGTCCGT GAAAACCAAC
GTGGTCCCAG GCTACTTCGC CTTTTCCGTA GACAGGAGGG TTATACCCGA GGAAAACGTC
GAAGATGTGA AACGAGAGTT CATCTCGTTC ATAGAGAGGG TCGCCAGAGA CATACCGCAT
AAGGTGGAGG TGAAGGTCAC AAACGTCTCC GAGGCCGCCC TCGTCGAGCC CAGCCACCCG
TTGGTCGAGA CGCTGGCGTC GGCTGTCGAG AAGGTAATCG GTAGAAGGCC TAGGAGGACG
GTGTGTATTG GCGGGTTAGA CGCAAGGTTT TTCATAAAGG CTGGGCTACC GACGGTCACA
TACGGGCCGG GGCCTATAGG GATGGCCCAC GCGCCTGATG AATACGTCGA AGTTAGACAG
GTGGTCAACG TGGCCGAGGC GTACCTCAAC CTCATCAAGA GCGTAAACGC AAAAGGTTAG
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| Protein sequence | MEEKAVSLLS KLISIPTVNP PGENYAQFVD AAERYFKSLG LDTEVLEVPR SEVASRCPEC
ADHPRYILLA RLGEPKIHFN GHYDVVPPGP QESWKITKPF EPLYRDGRLY GRGAVDMKGG
ITSIMLAVER ATAAGLKNFE VSLVPDEEIG GETGAGYLAR SGKVKAPWVI IAEGSGEDNI
WIGHRGLVWF MVEVYGKQTH GSTPWLGLNA FEGAVYIAHR LQEYIRAVST RASRYEYDDP
RGATPTVTIG GEVRGSVKTN VVPGYFAFSV DRRVIPEENV EDVKREFISF IERVARDIPH
KVEVKVTNVS EAALVEPSHP LVETLASAVE KVIGRRPRRT VCIGGLDARF FIKAGLPTVT
YGPGPIGMAH APDEYVEVRQ VVNVAEAYLN LIKSVNAKG
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