| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1445 |
|---|
| Symbol | |
|---|
| ID | 6165068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1283375 |
|---|
| End bp | 1284094 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641668603 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_001794816 |
|---|
| Protein GI | 171185897 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1378] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGGGC TGGAGAGGGT TATGGCCTTG TTGGGGGTGG GGAAGAGGGA GGTGCAGATA
TACATAACGC TGGTGGAGCG GGGGGCTCTG ACGGCAAGGG AGATCTCAGA CGCCCTGGGG
ATCCCATATA CAAAAGTCTA CCAACACCTC AACAGGCTTG AGAAGGCGGG GGCGGTCAAC
CAGGAGAGGG GGTCTAGGCC AGCTAAGTTT AAGGCTGTCC CGCCCTCGGA GGTCTACAGG
AGGTTGGTTA ACACGGCCTC CGACGTGTTG AAGACGCTTA AGCCCACGTT CGACACCTTG
CAGATGCTGT ACGAAAGCCG CTACAGAGAG GTGGCGCCGA CGTTTCTCAC GCTTATTCGA
GGCCAAGATC GAGTAGTGGA TCTCATACAG GAGGTGGTCA CCGCCGCCGA GGCTGAGGCC
TATCTCGCGA TACCCTTTCC AGAGGTCGCC ACATATAGGC TGTTGGCCAC GCTGACTGAG
GAGTCCAGGC GCATATCCAT AAAGGTGTTG ACCACTGAGG CGCTTAGGCA GAGGTTTGAC
CTCCCCCCGC GGGTGGAGGT TAGGACAACC CAGGAGATGT TCGGCGGAGG CGCCATCGGA
GGCGCCGTTG TTATATTTGT AAAATACGGC GGAGACATCT CCGGCATTTA CTCAAACGAG
AGATTTATTG CGGAGATAGC CCGTACATAC TTCAACCACC TCTGGCAGAG GGCAAGGTAG
|
|---|
| Protein sequence | MEGLERVMAL LGVGKREVQI YITLVERGAL TAREISDALG IPYTKVYQHL NRLEKAGAVN
QERGSRPAKF KAVPPSEVYR RLVNTASDVL KTLKPTFDTL QMLYESRYRE VAPTFLTLIR
GQDRVVDLIQ EVVTAAEAEA YLAIPFPEVA TYRLLATLTE ESRRISIKVL TTEALRQRFD
LPPRVEVRTT QEMFGGGAIG GAVVIFVKYG GDISGIYSNE RFIAEIARTY FNHLWQRAR
|
|---|
| |