| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1435 |
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| Symbol | |
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| ID | 6164660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1275654 |
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| End bp | 1276205 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641668593 |
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| Product | tRNA-splicing endonuclease subunit alpha |
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| Protein accession | YP_001794806 |
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| Protein GI | 171185887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGAG TTTTAAGAGG GCTCGCCGTA GTTGTCCAAG ACGTAGAACT CGCCAGGGCG
TTATACAGGG AGGGCTTCTA CGGCAGATTC CTCGGCTACG ACAAAGTTAA GCGAGACGAG
GTGGACAAGG TATCTGCCCC GCTAATCCTA GCCCTATACG AGGCGCTCTA CCTAGCCGAG
AGGGGGAGGA TCAAGGTTGT GGCTGAAGAC GGAGCCGAGA TCCCTCCGGA GAAGCTCGCG
GAGCTTGGGA GAGGGATGAT CAGAAACTTC GACGACGTAT ACAAGATATA CAAGTACTTC
CGGGACCTCG GCTACGTCGT AAAAAGCGGG CTTAAATTCG GCGCGTTGTT CTCGGTCTAC
GAAAAGGGCC CCGGCATAGA CCACGCGCCG ATGGTGGTGG TTTTTCTAGA GCCAGACAGG
GGGATCTCGG CCACGGATAT AACGCGTGGC GGCAGACTGG GCCACAGCGT GAAAAAGACC
TTTACCCTGG CGACTGTGCT CCGACAGACC GGAGAGGTGG TACTCCTCGG CTTTTCCTGG
GCTAAGCTTT AA
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| Protein sequence | MSGVLRGLAV VVQDVELARA LYREGFYGRF LGYDKVKRDE VDKVSAPLIL ALYEALYLAE
RGRIKVVAED GAEIPPEKLA ELGRGMIRNF DDVYKIYKYF RDLGYVVKSG LKFGALFSVY
EKGPGIDHAP MVVVFLEPDR GISATDITRG GRLGHSVKKT FTLATVLRQT GEVVLLGFSW
AKL
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