Gene Tneu_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1416 
Symbol 
ID6164528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1259787 
End bp1260947 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content57% 
IMG OID641668572 
Productpullulanase 
Protein accessionYP_001794787 
Protein GI171185868 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4945] Membrane-anchored protein predicted to be involved in regulation of amylopullulanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCA AGTATGGGCT TCTGATAATT ATGCTGGCTA CGTTGATATA TGCACAAGGC 
CTATTTACTG TCCAAACCGC GACGGATCCT AAGGGGGATT TCAACGGCCC GGGTTGGTAC
ACACCCCCTC TTAACCCAGT GTTCAAAAAC GGTACTGTTT TCGACATCAC CAAGTTCGAG
GTGCTCTATA ACGCGTCATC TGACGCGCTT ATTTTGAGGA TAACCTTCTC GGACCTGGGC
GGAAACCCGC TTAACTCAGA AACCGGGTTC TCTCTGCAGT ACATCCAGGT GTATATACAC
AGGGGGTTCC CCGGCAACCC GTGGGGGACG GTCAGTTGTA GCGTTCTAAG GCCGGAGGAC
GGCAACCCCG CGGCCGGCAA TGCCTTTTAC GACGAGGCCA CGCGCTTCTT CTGTCCAGAT
CCCGCGAACC TAACGCAGTT CAAGTACACG CCTGGGGTTA AGTTCTCCAG CTCCGCGCCC
TGGGATGTGG CGATCTTCAT AGGGCCGAAG TGGGGCAACG ATACGGTGAA CCTAGTCGCC
GTGGCCGATG TCACAGGTGG GACAATAAGC GTGTCCCCCC TGCCGCGTGT CTACACACAG
GGAAGCTCTG TTGTGGCCGT TGTGCCTAGG AAGCTGATAC CCCCAACGAC CAGGTTCATG
AGCGACTTTC CACAACCCAC ATGGAGATAC TACGTGTTGG TAACCGCGTA CGACCGCAAC
GGGCCTGGGA GGATAATACA GTTTGCCACG CAAGCCGACG CGTCTAAGGC CGGCGCCGGC
TCTGCCAACG CCTCGGCGAT TGCCTCAGGC ACGTTGCCTA GAGTGTTCGA CGTGTTGGGA
CCCAACGCCC CGCTTAGGAC GTTCTCCAAG GACTCCCCAG CTACGCTAGA GCCGCAGGCT
TTGAGCTGGG GCAACTTCCC GTTGGCCTAT ACCACATCCA CTGTCAACAG GCTCGTGCCT
GTGACGGTAA CTAAGACGGA TACGTTGACT GTGACAGAGA CGGCCACAGC AACGCAATAC
ATCACAACAA CAGCGACATC CTACGTCACG CAGACGCAAC AGATCTACGT GCCGTATGTC
GACCCGGTCA GCTACGTCGT ACTTGGGATA GGGGTGTTAG CCGGGATAGC GGGGGCTCTT
GCAGCCGCTA GACGTAAGTA A
 
Protein sequence
MNSKYGLLII MLATLIYAQG LFTVQTATDP KGDFNGPGWY TPPLNPVFKN GTVFDITKFE 
VLYNASSDAL ILRITFSDLG GNPLNSETGF SLQYIQVYIH RGFPGNPWGT VSCSVLRPED
GNPAAGNAFY DEATRFFCPD PANLTQFKYT PGVKFSSSAP WDVAIFIGPK WGNDTVNLVA
VADVTGGTIS VSPLPRVYTQ GSSVVAVVPR KLIPPTTRFM SDFPQPTWRY YVLVTAYDRN
GPGRIIQFAT QADASKAGAG SANASAIASG TLPRVFDVLG PNAPLRTFSK DSPATLEPQA
LSWGNFPLAY TTSTVNRLVP VTVTKTDTLT VTETATATQY ITTTATSYVT QTQQIYVPYV
DPVSYVVLGI GVLAGIAGAL AAARRK