Gene Tneu_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1402 
Symbol 
ID6164967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1245745 
End bp1246818 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content57% 
IMG OID641668557 
Productphage head-tail adaptor 
Protein accessionYP_001794773 
Protein GI171185854 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGG CTGATCTCCT GGTCGCAATT CACCGGTGTC TAGGCGGGAT CTCCACAAGG 
AGCTTGATAT ACGCGTTGGC GGACGTATAT GCGAGAGCGC AGTTGGGGGA CGTGGACGGG
AACAAGGTTC TCGAGATATT GGCCCAAAAC CTAGCCGGCT ACCTACGCCT CAGCCCCTCT
GAGGCTAAGA GGGTCATAGA GGCGGCGTTG AGCTGCACGC CGTCAGCCGA GGGGGGTTAC
ACAACGGCGG CTACCGCCGC AGTGGGGAGG GAGGAGGCTC CCACCCTGGC TCACCTGGTC
AACAGATACG TCCCAGTCGA CGCGACGCCC CGCGTAAAAC TGGAGGTCAT AAAGAGGCTT
AGCCTACCGC GGGACGCGGT TGAGGAGTCC AAGGCGAACA TCGTGGCACG CGGCGCAGGC
CTTCTACACG TGAAATCCGC CGTGAGATCC ATACGGCAGT ACACGCCCTA CTCCCCACCC
TCAGATGTAG ATCTCATAAA AACCGCCGTC TCGGTGGCGA GGAAGGCTGC GTTGGGCAGA
CCGATATCGG ACGGCGATCT GTACATCCGG GAGTACACAC ACGTGATAGA CAAGCCTATC
TACGTGGCGT TAGACGTCTC AGGAAGCATG AAGGAGTACC TCGGCCCTTC GACGAAGCTT
AGGGTCGCCA AAAACGCCGT CGCGAGATAC TTACGCCAGG TAGCCCAGCT ACGCGGCTCC
GTCTCGCTCG TCTTGTTTAA CGTAGGCGCT GACTTCATGT GGACCCCCCA CCCCGTCCAC
CGCTACCTGG GAGATATGTT GGAGATCTTG AGGTACATCT ACGCCATGGG GGGCACAGAG
CTTGCCTCTG CGCTAGAGCT ATTACACAAC CACGGCGTTG TGAACGACGT CGTTGTGATC
ACAGATGGAC GAACCAGCGA CGTTGAAAAA GTCCTCGACT TAGCCAAAAG GTTCAGGCGG
CTCCACGTCA TCGCCACCGA GAAAAACCCC TTTTTGAAAC AAATAGCTAA AATAACAGGC
GGGAGGTACA GAGAGCTAGC CCCCACACTT GACATATTGG AACTACATAG CTAG
 
Protein sequence
MELADLLVAI HRCLGGISTR SLIYALADVY ARAQLGDVDG NKVLEILAQN LAGYLRLSPS 
EAKRVIEAAL SCTPSAEGGY TTAATAAVGR EEAPTLAHLV NRYVPVDATP RVKLEVIKRL
SLPRDAVEES KANIVARGAG LLHVKSAVRS IRQYTPYSPP SDVDLIKTAV SVARKAALGR
PISDGDLYIR EYTHVIDKPI YVALDVSGSM KEYLGPSTKL RVAKNAVARY LRQVAQLRGS
VSLVLFNVGA DFMWTPHPVH RYLGDMLEIL RYIYAMGGTE LASALELLHN HGVVNDVVVI
TDGRTSDVEK VLDLAKRFRR LHVIATEKNP FLKQIAKITG GRYRELAPTL DILELHS