Gene Tneu_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1398 
Symbol 
ID6164834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1242218 
End bp1243360 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content58% 
IMG OID641668553 
Producthypothetical protein 
Protein accessionYP_001794769 
Protein GI171185850 
COG category[S] Function unknown 
COG ID[COG1679] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.492056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCCG GTTTGGTGGC GGTGGCGTTG GAGTACGCCA GAGAGGCGGT TTTAAAGATC 
GCAGATGCCA TCTCCGAGGG GGAGGTCGTT CCCGTGGAGA CGGCTCACGT GTCGGGGGTT
TCCTACATAA CCATAGGGGA ACACGGAATC GAGTTCCTGG AGTTCTTAGC ATCGTCGGGG
GCTAAGGTGG CCGTTTTCAC AACCTCGAAC CCAGCCGCCG TGGACCTAGG CGGCGTGTTG
GAGGTAGATG AGAAGACTCT GGAGGGGCAG AGGCGGATAT ACAAAGCGCT ACTGACGATG
GGTGTGTCCA CCATATCGTC GTGTACCCCC TACGAATTTA TCATGACTAG GCCGCGGACC
TTCCACGCAT GGGCTGAGTC AAACGCCATC ACCTACATAA ACACCTTCAG AGATGCGTGG
TCAGATAAGA ACCCTGGCCC CCTCGCTTTG TTGGGCGCGA TTGCGGGTTA CGTGCCTAAG
ACCCCCCTTT ATACCATCGA GGGGAGGCGC CCAACGGCGC ATGTTAAAAT CGAGGTGGGC
CCCTTGGATT CGTTGGAGGC GGGCGTCGTG GGAGCTCTAA TAGGAGAACG CCTAGGCTCT
GGGGTGCCCT ACCTCAGCGG GGCTGTTTTC CGAGACGAGG AAAGCCGGAG GGAGTTCGCC
GCTGCGTTAT CCACCTACTC CTCCATGGTC TTCGCGGTGG TCGAGGGGAC GACGCCTCAT
TGGCGGGAGT ATCTACATAT GGGGGACTTC CGCGACAGGA TCACGATTTC GAGAGAAGAC
GTGGCGAAAT ACCTAGGCGA CGTGGAGACG CCGGACGCGG TGTATATAGG CTGTCCCTTC
GCCGATCCAG ATACAGTGCT GTGGGTGTTG GGGGAGGTTA AGAAGAGGGG GCCCGCCAAG
AGGCCGATAT ACGTTTCGAC GTCGCCACAC GTCTATCGAC AGCTCGGTAA ACTGGTTGAG
GCGGCTTCGC GCCTCAACGT GGTAATCTTC GCAGGCACGT GTCTAGTGGT ATCGCCGTTT
ACCAAGAGGT TCAAGTCCAT CGCCACGGAT TCGCTAAAGG CGGCGTTCTA TATACCGAGG
CTCCACGGGG TGAGGGTAAC TCCCTGCAGA AGAGAGAGGT GTATAGAGCT TGCCTATGCT
TAA
 
Protein sequence
MGSGLVAVAL EYAREAVLKI ADAISEGEVV PVETAHVSGV SYITIGEHGI EFLEFLASSG 
AKVAVFTTSN PAAVDLGGVL EVDEKTLEGQ RRIYKALLTM GVSTISSCTP YEFIMTRPRT
FHAWAESNAI TYINTFRDAW SDKNPGPLAL LGAIAGYVPK TPLYTIEGRR PTAHVKIEVG
PLDSLEAGVV GALIGERLGS GVPYLSGAVF RDEESRREFA AALSTYSSMV FAVVEGTTPH
WREYLHMGDF RDRITISRED VAKYLGDVET PDAVYIGCPF ADPDTVLWVL GEVKKRGPAK
RPIYVSTSPH VYRQLGKLVE AASRLNVVIF AGTCLVVSPF TKRFKSIATD SLKAAFYIPR
LHGVRVTPCR RERCIELAYA