| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1383 |
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| Symbol | |
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| ID | 6165290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1230294 |
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| End bp | 1230992 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641668539 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_001794755 |
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| Protein GI | 171185836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAGA AGGTGGCCGT TGCTAAACTT GACAGAGGCG GCGACCATTT CGAAATTCTG
ATAGATCCCG ACGCGGCGTT AGAGCTGAAG CTGGGAAAGC CTCTGGGAAT AGACAAGGTG
CTCATACACG AGGAGATATA CAAAGACGCC AAGAAGGGCC TGCGCGCGTC GGAGCAGTCT
CTAAAGAAGG CCTTCGGCAC CACCGACGTT AGAAAGATCG CCGAGATAAT AATAAAGGAG
GGCGAGATAC CTCTAACCTC TGAGCAGAGG AGGAAGCTCG TCGAGGACAA GAAGAGGCAG
ATTGTGGAGT GGATCTCCCG CAACTGCATC GATGTTAGGA CTAAGACGCC GGTGCCTCCC
CAGAGAGTTG AAAACGCGAT AGAGCAAGCC CGCGTATCTA TAGACCCCTT CAAGTCGGTG
GAGGAGCAGG TGCAGGAGGT GCTCAAGGAG ATACAGAGGA TCATCCCGAT AAAGGTCGCC
ACGGCTAGAG TCTCCCTATC TGTCTCGTCG AGTCATGCGC AGAGGGTTAA GGGCTTGGTG
GCTAAGATGG CGAAGATAGT AAGCGAGAGA TATAGGCCAG ACGGCTCTTG GGAGGCCGTG
TTGGAGATGC CTGCGGGTAT ACAGGACATG TTAATTTCAA GGGTGAACGA CATAACCCAC
GGGGATGCAG ATATTAGGAT CCTGGAGATA GTGTACTGA
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| Protein sequence | MTKKVAVAKL DRGGDHFEIL IDPDAALELK LGKPLGIDKV LIHEEIYKDA KKGLRASEQS
LKKAFGTTDV RKIAEIIIKE GEIPLTSEQR RKLVEDKKRQ IVEWISRNCI DVRTKTPVPP
QRVENAIEQA RVSIDPFKSV EEQVQEVLKE IQRIIPIKVA TARVSLSVSS SHAQRVKGLV
AKMAKIVSER YRPDGSWEAV LEMPAGIQDM LISRVNDITH GDADIRILEI VY
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