| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1378 |
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| Symbol | |
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| ID | 6164471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1227062 |
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| End bp | 1227601 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641668534 |
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| Product | ribosomal biogenesis protein |
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| Protein accession | YP_001794750 |
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| Protein GI | 171185831 |
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| COG category | [A] RNA processing and modification
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2136] Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.745647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGTTC GCGTTTTGAT AACAACCTCC AGGCTCCCCT CCAAGAAGAC CCTTGAGTTG
GTTAACGACC TTGTAAACTC CCTGCCGGGG ACCGACAAGG TGGTTAGAGG TAAGAAGCCC
TTTATGGCTC TTCTTGAGGA GGCGGCGATT GCGGAAGCTC GATACATCTT GTTCATATGG
GATAGGAGGG GCATGCCCTC CGCCCTTCTT TTCTACGACG TGGCACAGAG GGCGTGGAGG
CCGTATATGC TCAAGATCTC GGGCATAAGG ACCAGGCGAG AGCTCCCAGT CTACGTGGCT
AGAAGGCCGC GCGCCAAAAC GGCCGTCATA GTTGACTTAG CTGGTGGAGA GGTCGGCGAC
GTGTTGGCTG AGGTCTTCCA CTACCCCATA ATGTATGACC TCGAGGCGGC GAGGGGGCGC
TTCGACACCG TGATCCTCAT CAGGAGCGGG GACGGCTACG TGGTGGAGCT TCTAGGCCCC
GACCTCGGCC CTAGGGCGTC TATGCTTAAG ATCGAAAAGA TCGTTTATAG ACATGTATAG
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| Protein sequence | MGVRVLITTS RLPSKKTLEL VNDLVNSLPG TDKVVRGKKP FMALLEEAAI AEARYILFIW
DRRGMPSALL FYDVAQRAWR PYMLKISGIR TRRELPVYVA RRPRAKTAVI VDLAGGEVGD
VLAEVFHYPI MYDLEAARGR FDTVILIRSG DGYVVELLGP DLGPRASMLK IEKIVYRHV
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