Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1347 |
Symbol | |
ID | 6165239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1204625 |
End bp | 1205986 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641668502 |
Product | geranylgeranyl reductase |
Protein accession | YP_001794719 |
Protein GI | 171185800 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0129504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAGA GATTTGACGT TGTTGTAGTG GGGGCTGGGA CAGCTGGCGC TTTTGCCTCG TACCTCCTCG CCAAGAACGG GTTTAGGGTC GCCCTCCTCG AGTCTAAAAG CGGCCAGGAG ATAGGGGTTA AGACCTGCGG CGATGGGCTA GGCCTACACC ACGTGGAGAG GATCTCTAGG CACATAACCC CCAACCCCAA GGTGTTTCAG AACAAGATCG AAGGCGTGGA GCTGATAAGT CCTGACGAGA AAACCAGGCT TGTCATAAAG GGGGAGGGCT ACGTGCTGGA TAGATTTGCG TGGGGGAAGT GGTTGGTTGA GGAGGCGGTG AAGGCCGGGG CCGTCCTATA CGAGGGACAC ACGGCCACGA CCCCCCTAGT CGACAACGGG GCGGTGGTGG GCGTAAGGGC TGTGGAGAGG AGGACGGGTA GCCCTAAGGA GTTTGCGGCG AAGGTGGTGG TGGACGCCTC GGGATCAGCC GCCGTGTTGA GGAGCAAGCT GGCGGGCTGG CCTATTTCGG AGCCGCTTCA TCCTGAGGAC GTCTCCCACG CCTATAGGGA AATCGTGTAC GTGGAGGAGC CTCTGGATTC TCCGCAGTAC ATCAAGATAT ATCTTGACAT GGTCACGGCG CCTGGGGGCT ACTGGTGGAT CTTTCCGAGG AGCGCCACGA TGCTCAACGT CGGGTTGGGG ATTTGGGGGA TACTGAAGCA GAACCCGAGG ACGAACTACG AGAGGTATAT ACTGCCGCGG TTTAAGATAA AGGGCAAGTA CCACATCGGG GGAGGGTTCA TACCGACGAG AAGACCGCTG AAGAGCCTGG TGGGGAACGG GATAGTTGCG CTTGGGGACG CGGCCGCCGC GGTCAACCCG ATACACGGCG GCGGGATCGG CCAAGCGTTG CTCACGGCGG AGCTCGCCTC TAGAGCTATA TCGAAGGCCT TTGAGGCGGG GGACTTCTCG GAGAAGGCGC TGTGGGAGTA CAACCTCCTC TACATGAGGG AGTGGGGGTA TAGGCAGGCT CAGCTCGACG TCTTACGCCT CATGCTTCAG ACTCTCGACA ACGACGACCT CAACTTCGGG CTCTCCCGGA AGATCCTCAA CGAGGACGAG ATATACCACC TGGCGGCGAA GGGTACGAAC ATATCCATAG TCGACAAGCT GAGGGTGATG ATGCAGTTCA TCGGCAGACC TGCCTTGTTG AAAAAGCTCA GCACGTCTAT CCAGTACGCC AAGGAGATAG GGGATCTCTA CCTGGCCTAC CCAGGCGAGA GGGCTGAGCT AGAGCGGTGG CACAGCAGGG TGGTGGATAA GTACAACGAG TTCCGCGAGA AAATCGGGCT AGGGCCTCTG CCGGCTGAGT AG
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Protein sequence | MVERFDVVVV GAGTAGAFAS YLLAKNGFRV ALLESKSGQE IGVKTCGDGL GLHHVERISR HITPNPKVFQ NKIEGVELIS PDEKTRLVIK GEGYVLDRFA WGKWLVEEAV KAGAVLYEGH TATTPLVDNG AVVGVRAVER RTGSPKEFAA KVVVDASGSA AVLRSKLAGW PISEPLHPED VSHAYREIVY VEEPLDSPQY IKIYLDMVTA PGGYWWIFPR SATMLNVGLG IWGILKQNPR TNYERYILPR FKIKGKYHIG GGFIPTRRPL KSLVGNGIVA LGDAAAAVNP IHGGGIGQAL LTAELASRAI SKAFEAGDFS EKALWEYNLL YMREWGYRQA QLDVLRLMLQ TLDNDDLNFG LSRKILNEDE IYHLAAKGTN ISIVDKLRVM MQFIGRPALL KKLSTSIQYA KEIGDLYLAY PGERAELERW HSRVVDKYNE FREKIGLGPL PAE
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