Gene Tneu_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1332 
Symbol 
ID6165208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1192247 
End bp1192678 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content51% 
IMG OID641668487 
Productlike-Sm ribonucleoprotein core 
Protein accessionYP_001794704 
Protein GI171185785 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.147684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAA CTCTAGCTGA AGCAAGCAAG CGGTTTGTCG CCGAGTTGAA CAACCTCATC 
GGTAGGGAGG TTCAGGTAGT CTTGTCTAAT GGGGAGGTCT ACAGGGGCGT GCTGCATGCG
GTAGATAACC AGTTGAACAT AGTGCTGGCC AACGCCGCGA GTAAAGCCGG GGAGAAGTTC
GTCCGTGTGT TTATCATGTA TAGATATATC GTTCACATAG ACAGCGTCGA AAAAAGGATA
GACCTGAGGG AGTTTGCAAA ACACGCCGAG AAGGTTTTCC CAGGTATGGT TAAATATGTC
GAGGAGACCA ACACGGTCCT CATAGGGGAC AAGGTGCGCG TCAGCGAAGT CGGCGTAGAA
GGGGTAGGGC CCGTAGCCGA AAGAGCCAAG AGGCTGTTCG AGGAATTCCT CAAGTCGAAG
GGAATTGAAT GA
 
Protein sequence
MSTTLAEASK RFVAELNNLI GREVQVVLSN GEVYRGVLHA VDNQLNIVLA NAASKAGEKF 
VRVFIMYRYI VHIDSVEKRI DLREFAKHAE KVFPGMVKYV EETNTVLIGD KVRVSEVGVE
GVGPVAERAK RLFEEFLKSK GIE