Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1332 |
Symbol | |
ID | 6165208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1192247 |
End bp | 1192678 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641668487 |
Product | like-Sm ribonucleoprotein core |
Protein accession | YP_001794704 |
Protein GI | 171185785 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.147684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACAA CTCTAGCTGA AGCAAGCAAG CGGTTTGTCG CCGAGTTGAA CAACCTCATC GGTAGGGAGG TTCAGGTAGT CTTGTCTAAT GGGGAGGTCT ACAGGGGCGT GCTGCATGCG GTAGATAACC AGTTGAACAT AGTGCTGGCC AACGCCGCGA GTAAAGCCGG GGAGAAGTTC GTCCGTGTGT TTATCATGTA TAGATATATC GTTCACATAG ACAGCGTCGA AAAAAGGATA GACCTGAGGG AGTTTGCAAA ACACGCCGAG AAGGTTTTCC CAGGTATGGT TAAATATGTC GAGGAGACCA ACACGGTCCT CATAGGGGAC AAGGTGCGCG TCAGCGAAGT CGGCGTAGAA GGGGTAGGGC CCGTAGCCGA AAGAGCCAAG AGGCTGTTCG AGGAATTCCT CAAGTCGAAG GGAATTGAAT GA
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Protein sequence | MSTTLAEASK RFVAELNNLI GREVQVVLSN GEVYRGVLHA VDNQLNIVLA NAASKAGEKF VRVFIMYRYI VHIDSVEKRI DLREFAKHAE KVFPGMVKYV EETNTVLIGD KVRVSEVGVE GVGPVAERAK RLFEEFLKSK GIE
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