| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1309 |
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| Symbol | |
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| ID | 6165387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1166531 |
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| End bp | 1167904 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641668464 |
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| Product | Alpha-amylase |
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| Protein accession | YP_001794682 |
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| Protein GI | 171185763 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.485792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.72341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTTG TGCTTTTTCT AGAGGTGCAC CAGCCCCGGA GGATAAGGCC GGACCTCCAC
AGGGTATACC CAAGAAGGCC GAGCGACGTG GAGATCTTCT ACGATGAGCT AAACGCCGCC
ATCTTCAGGA GGGTCTCCGA AAGAGTCTAC CGGAAGGCCA CCAAGATCAT ATATGAGGCG
GCGCTGGAAA CGCCGGGTTT CAAGGTGACC TTCAGCCTAA GCGGCCTAGC CCTTGAACAG
TTCCGGAGGC ACGCCCCAGA CGTCCTAGAC CTCTTCCGGG CGTTGGCATC GCGGGAGGCG
GCTGAGTTCA CCGCCCAGAC CTACTACCAC AGCCTGGCAT GGTTCATAGA CAGGGAGGAG
TTCAGGGAGC AGGTGGAGAT GCAGAGGAAG GCCGTGGAGG AGCTAATCGG CGTAAGGCCG
AGAGCTGCCG AAAACACCGA GTTCATCTAC AACAACGACA TCGCGTGCTT CCTCCACTCC
ATGGGCTTCG AGACGGTGGT GACGGAGGGG GTGGACTGGG TTTTGGGGTG GCGCTCCCCC
AACTACGTCT ACAAGGCCTG GGGCTGCGAC GCGAGGGTGC TGGTCCGCAA CTACAGACTA
AGCGACGACA TAGGCTTCAG GTTCGGGGCT AGGTGGTGGG ACCAGTGGCC GCTGACTGCG
GACAAGTACG CCTCGTGGCT TGACGCAACC CCAGGCGACG TGGCGTTCAT AGCAGTAGAC
TACGAGACGT TTGGGGAACA CCACTGGCCG GAGTCCGGCA TCCACGAGTT CCTCAGGTGG
CTCCCGAGAG AAATCGCGAA GAGGCCGCGT CTTAGATTCG CCACGGTCTC AGAGGCGGCG
TCCCTCCACC CGCCAAGGGA TACATACGAC GTCCCCCCCT GGGCCACCAT CAGCTGGGCG
GACGAAAGAG ACCTATCTGC GTGGCTGGGG AACGAGATGC AGCGCAGCTC CTTCGCCCTA
CTCACGTGGC TTTACCCATA CGCGAAAGCC CTCGGCGGGG AAACGCTGAA GCTCTGGAGA
GAGCTCTCCA CAAGCGACCA CTTCTACTAC CAAGCGACCA AGACGGGGCC CGCGGGGGAG
GTCCACTCCT ACTTCAGCCC CTACGGCTCC GCCTACAAGG CACACGACGT CTACATGGCG
GCTCTGACGG CCTTGTTGGT GGAGATCAGG GAGAAGTGGA GCGCAGAGGC CGCAGAAAGG
CTTGTGTTTA ACGACGAGAG GTGCTTCCAC GGCCACGGGG CGAGGATCTG TTCGCTGAAG
GAGCTGAGGA ACACAGACGC CGGCTTCAAG AAACGCCACC GCCAAGACCT CAAAAGGTGG
CTCACAGACG TCTTCCTCCT TTCTCCACAA GAGGCGGAGA GGATCCTCGG CTGA
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| Protein sequence | MHVVLFLEVH QPRRIRPDLH RVYPRRPSDV EIFYDELNAA IFRRVSERVY RKATKIIYEA
ALETPGFKVT FSLSGLALEQ FRRHAPDVLD LFRALASREA AEFTAQTYYH SLAWFIDREE
FREQVEMQRK AVEELIGVRP RAAENTEFIY NNDIACFLHS MGFETVVTEG VDWVLGWRSP
NYVYKAWGCD ARVLVRNYRL SDDIGFRFGA RWWDQWPLTA DKYASWLDAT PGDVAFIAVD
YETFGEHHWP ESGIHEFLRW LPREIAKRPR LRFATVSEAA SLHPPRDTYD VPPWATISWA
DERDLSAWLG NEMQRSSFAL LTWLYPYAKA LGGETLKLWR ELSTSDHFYY QATKTGPAGE
VHSYFSPYGS AYKAHDVYMA ALTALLVEIR EKWSAEAAER LVFNDERCFH GHGARICSLK
ELRNTDAGFK KRHRQDLKRW LTDVFLLSPQ EAERILG
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