| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1295 |
|---|
| Symbol | |
|---|
| ID | 6165646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1154774 |
|---|
| End bp | 1155478 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641668450 |
|---|
| Product | TatD-related deoxyribonuclease |
|---|
| Protein accession | YP_001794668 |
|---|
| Protein GI | 171185749 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGACA ACCACGTCCA CTGTCACGAG TTTCCGAGGG AGGAGCTGGA GGGGTACACC
AGGGAGTGGA CTCTGGTCTG CGTCTCAGAC GACCTAGCCA CCTCGAAGAG GACCGCGGAG
CTGAGGGGAG CCGTGCGTTG CGTGGGGATA CACCCCTGGC AGGTGGACAA GGCCGAGCCG
GGGGATCTAG AGGCTGTAGT CCGCCTCGCC GAAAAGGCGG AGGTGCCCTG CGTAGGCGAG
GTGGGGCTAG ACAGGAGGTT TGTCCCCCAG ACGTTTGACA AACAGCGCGA GTTCTTCAGA
GCCTTCCTAA GGCTGGCCAG GGAGCTCGAC CTCGTGGTTA ACGTCCACGC GCCGGATGCA
TGGGCCGACG TGGTGGAGGA GCTTAGGAGA GCCGACGTCG ATAGGGCGTT GATACACTGG
TACACAGGCC CCCTCGACCT ACTGGAGACG ATCAGAGACC TGGGCTACTA CATCTCCATA
AACCCAGCCG TGGTGATCCA GAAGAAGCAC CAGGAGGTGG CGAAGGTTGC CGACAGACGG
ATCGTGTTGC TCGAAAGCGA TGGGCCGTAC GAGTACCGGG GGATGAGGCT GGCGCCCCCG
CTGATAAACA AGACCGTGGA GAAGCTGGCG GAGCTCTGGG AATCGCCGAG GGATCAGGTG
GTGGAGACCG TGGAGTCAAA CGCCAGAAGG CTATGGCGTC TGTAG
|
|---|
| Protein sequence | MFDNHVHCHE FPREELEGYT REWTLVCVSD DLATSKRTAE LRGAVRCVGI HPWQVDKAEP
GDLEAVVRLA EKAEVPCVGE VGLDRRFVPQ TFDKQREFFR AFLRLARELD LVVNVHAPDA
WADVVEELRR ADVDRALIHW YTGPLDLLET IRDLGYYISI NPAVVIQKKH QEVAKVADRR
IVLLESDGPY EYRGMRLAPP LINKTVEKLA ELWESPRDQV VETVESNARR LWRL
|
|---|
| |