| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1260 |
|---|
| Symbol | |
|---|
| ID | 6165849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1129344 |
|---|
| End bp | 1130435 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641668411 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001794633 |
|---|
| Protein GI | 171185714 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTG CCGTCGTTGG AGGCGGCATC ATAGGCCTTT TTACGGCATA CCACCTGCGG
CAACAAGGCG CAGATGTCGT GATAATAGAC CAGGGCGAGC CCGGCGGCTG GTCTAAAGCG
GCGGCGGGAA TACTCGAGTT CACCCGCTTC GTGATCAACC GGATCAACGT GAGGTCCTAC
CCCCGGAGGT ACCTCTCCAT GGCTCTCCGC GGCGACGCCA GGATAAAGAC CTGGGACTGG
GGCTGGATTT CGGCGTATCT CAAGGCGTGG GGGAGGGAGC CCACCCAGGA CATGTGGGAG
GCCATAAAAA CCCTCGGCGA ATACTCCCGG CGTCAGTACA GAGCGCTGGC CGAGGCGGAA
AACGACTTCG CCTACTCGGA GGAGCCTCTC TACGAGGTGG GGATAGACGT GGCGGCGGCG
CTGGAGGAGG CCAAACGGGA CCCCCTATCG CCGAAGGTGG AGGCGGGCAG ATGCTGCGGC
AGAGAGGCGC TGGCGTATCT AGACGCCGCG AGGCTATCCA CAGAAGACTT CGTAGCTAGG
ATGCTTAGAG AGCTACGGGG GGTCCAGACG GTGAGGAGGA GGGCGCAGGA GGTGGCCGGC
CGGGAGGTCT GGCTAGAGGG CGGCGACGTG GTGGGGGCAG ACGCCGTTGT GGTGGCTGCT
GGCTACTGGG CGAGGAAATT CGGAATCCCA GTCGCCCCCT TTAAGGGCTA CGGCTTCAGA
ACCACGGCCA AAGCCCAGAA CATGTTTATA GAAATGGCCA AGGGGGTCGC GGTGGTGCCC
CTCCCCAAGT GGACAAAGGT AACGGGTAGG TTCGACCTAG ACGGCACGGA GGACCACAGC
CCCTCCGCCA GGGTGTTGCA GAGAGCCCGC CAGATCTTGG GCAACTTCGA GGTTCTGGAG
ATGTCGGTGG GCTACAGGCC CTGTACCCCA GACGGGTTCC CCGTGGTGGA CAAGGTGGGC
GAGGTCGTGG TAGCCACGGG GGCGTGTAGA CTCGGCTGGA CCTACGGGCC CGCCCTGGGG
AAGCTAGCCG CCGACCTAGC CCTCGGGAAG CCCGGGATAG AGGCCCTCAC CGCGCGCCGA
TTCCGCCGCT AG
|
|---|
| Protein sequence | MKVAVVGGGI IGLFTAYHLR QQGADVVIID QGEPGGWSKA AAGILEFTRF VINRINVRSY
PRRYLSMALR GDARIKTWDW GWISAYLKAW GREPTQDMWE AIKTLGEYSR RQYRALAEAE
NDFAYSEEPL YEVGIDVAAA LEEAKRDPLS PKVEAGRCCG REALAYLDAA RLSTEDFVAR
MLRELRGVQT VRRRAQEVAG REVWLEGGDV VGADAVVVAA GYWARKFGIP VAPFKGYGFR
TTAKAQNMFI EMAKGVAVVP LPKWTKVTGR FDLDGTEDHS PSARVLQRAR QILGNFEVLE
MSVGYRPCTP DGFPVVDKVG EVVVATGACR LGWTYGPALG KLAADLALGK PGIEALTARR
FRR
|
|---|
| |