| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1253 |
|---|
| Symbol | |
|---|
| ID | 6165899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1124793 |
|---|
| End bp | 1125797 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641668404 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001794626 |
|---|
| Protein GI | 171185707 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.40136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGCGTA GAGATGATAT AAAGACCAGC CTTGTTAGCC CCGTGGATGT TGTCGTCTCG
TCCACTCTGG TCGAGTCCAC CCGCTTGGTG TCTCAGAGAC ATGTAAACCC ATTCGGGGCG
CTGTATGGCG GGTACATGCT AAGGTGGGTT GTGGAGGTGG GTAACGTGGC GGCGATGAGT
TTTGTGGAGG GCGACGCGGT CTTGGGCTAC CTGGACAAGA TGCACTTCTT AACCCCAGCG
AGAGCCGGCG ACCTGCTGAA GTTCAGAGCT TGGGTTGTGG AGTCTAGACG TACAAGCGTC
TCGGTGCTTG TGGAGTCCTA TAGGGCGGGC GGCGCCGAGT TGGCCACCGT GGGTAGGATG
GTGTTTGTGA AAATTGGGCT AGACGGGAGA CCGGTCCCCG TTAACAAGGG CGTACGTTGC
GACGCCGGCT GGGAAGATCT CTGTCTTTAT TTCAAGAGGT GGCGGTCGGA GGTGGACGCC
GCCGTTAGAG GCGAGATGCC TAGGGCGGGG GACGACTGGC GCGACGTAAG CAAGTTCCTC
GCGATGCCTG AGGACTCCGT CGACGGGCTT TTGATGGACG GAGGGCGGCT CCTCTTTAGA
CTTGACGAGC TGGCCTACAT CAAAGCCTTC CAGTTCTACC CGGCGACGTA CGTCACAGCG
GGGGTCAACA GGATAATCTT CAGGAAGCCT ATATACGTAG GCGACATCGT GGCCGTGAAA
ACCGGCGTTA CATATGTGGG CTCCACCAGC GTGGAGATCG GCTTCACCGT GGAGGCGTGG
GGGCGGGGCG GAGTTAGGCA TGTAGCAGAC GGCTACTTTA CCTTTGTAAA CATGTCGGAG
GGGAGGCCCA CCGCCATCAA CGCCCCGCCT CGGGGGGACG AGGCGGCTAG GAGGAGGAAG
GAGGAGAGCG TCAAGGAGGC CAAGCTGTTA AAGGGGCTTA GGCCCCCCGC CGGGGCGGAG
CCGTGGCTCC TCCAGCTAGC TAGAGGTTCT CAACAAGGTG GCTGA
|
|---|
| Protein sequence | MGRRDDIKTS LVSPVDVVVS STLVESTRLV SQRHVNPFGA LYGGYMLRWV VEVGNVAAMS
FVEGDAVLGY LDKMHFLTPA RAGDLLKFRA WVVESRRTSV SVLVESYRAG GAELATVGRM
VFVKIGLDGR PVPVNKGVRC DAGWEDLCLY FKRWRSEVDA AVRGEMPRAG DDWRDVSKFL
AMPEDSVDGL LMDGGRLLFR LDELAYIKAF QFYPATYVTA GVNRIIFRKP IYVGDIVAVK
TGVTYVGSTS VEIGFTVEAW GRGGVRHVAD GYFTFVNMSE GRPTAINAPP RGDEAARRRK
EESVKEAKLL KGLRPPAGAE PWLLQLARGS QQGG
|
|---|
| |