Gene Tneu_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1242 
Symbol 
ID6166004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1117575 
End bp1118375 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content59% 
IMG OID641668392 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001794615 
Protein GI171185696 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTA GAAAAGGTAT AAAACTGCTC AGGGGATCGC CCAACACCCT CATAGCGGGG 
GTATATGTGG TGGATCCGGG TCAGCCGGAG ACGAGGGCTC TGGAGATTGT GTCCCAGGTC
GGAGGTCCTC CCACTGTACT CCTCACACAT TTCCACGCAG ATCACCTCTC GGCAGTTCCA
GACGGCTCAA CCGTCTACGC ACCATGGGGA GAGGAGCTTT TTGTCGCAAG CGTTAAGGCG
CGTCTGTTTT TAACCCACGG CGTATACGTC GACAAGGCAG TCTACAAGGG GCGCGACTTG
AAGGTAGATG GCGTGGTGAA GGCGGGCGAC AGGGTAGGCC CCTTCGAAGT TGTCCACCTG
CCGGGCCATA CCTTTGGACA CGTGGGATAC TACGCCGACG GCCTGCTCTA TGCCGGCGAC
GCGATATTCG GCGAAAAGGT GTTGGAGAAA TACGGAGTCC CCTACCTGAT GGACTACTCA
GCATTCCTCA ACACGTTGGA CCGTATACTC TCGCTTGAGC CGGAGTTGCT TGTGGTCGGC
CACGGCCCCG TGGTGGGGAG CAAGAAGAAG ATCTCCGAGC TAGTCGAGAC GAATAGAAAG
GCAGTGGAGA GGGCCTACAA GCTTGTGGAG GCCGCGTTGC CCGGCGATGT GTTAACGCTG
GCTAAAAACC TGCTGAAGAG GCTGGGGGTG GAGGCTGGCT GGGAGAACCT GCTCCTCACC
GCCACCACCG TCCGCGCCGT ACTGTCGCAC CTTTCAGCTG AGGGTAGGGC GCAACCCGAC
GAATTCGGCG TATGGCGCTA G
 
Protein sequence
MELRKGIKLL RGSPNTLIAG VYVVDPGQPE TRALEIVSQV GGPPTVLLTH FHADHLSAVP 
DGSTVYAPWG EELFVASVKA RLFLTHGVYV DKAVYKGRDL KVDGVVKAGD RVGPFEVVHL
PGHTFGHVGY YADGLLYAGD AIFGEKVLEK YGVPYLMDYS AFLNTLDRIL SLEPELLVVG
HGPVVGSKKK ISELVETNRK AVERAYKLVE AALPGDVLTL AKNLLKRLGV EAGWENLLLT
ATTVRAVLSH LSAEGRAQPD EFGVWR