Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1235 |
Symbol | |
ID | 6166104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1111886 |
End bp | 1113223 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641668385 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001794608 |
Protein GI | 171185689 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAGGA GGGATCTGCT GAAGATAGGC GGCGGCTTCA TAGTTGGTCT CGCCGCCGGC TACGGAATCG GCAAGTTTTT CCAGCCCGCC ACGGTGGAGG TGGTGAAGCC GGGCGGCACC GAGACCATCA AGGCCGCCAC GACCACCACG GCAACAAAGG CGCGGCCAAA GACGTTTAAA CTTGCGGTTG TGGCTTATCA ATCCGGAGCC GCCTCTGTCT TCGGAGTTCC AGCCGTCAAC ATGGCTAAGC TCTTAGTCGA TAGGATAAAC GCCGGAGGCG GCATAAACGG GGTCCCCGTG GAGCTGGTGG TTAGAGACGA GGCTGGGGGG CCTGACCAGA TGGTGGCCTT GTACAGACAA CTCACTCAGC AGGAGGGCGT CGACGCCTAT GTGGGCCTCA TCTCCAGCGC CGACTGCCTC GCAGTGGCGC CTGTGGCGGA GCAACTTGGG ACTGCCCTCA CTGTGTTTTT CGACTGCGCC ACGAAGCAGC TGGTGGATAA GGGCATCATG AAGAAGGTCA CCTTTAGAAC CGCCACGACC ACCGCCCAAG ACAACGTGGC GCTTGTGAAG TACCTGCTGG AGGTGAAGCC GGATTTCAAG ACCGTTGTTG GGATTAACCA GGACTACGCC TACGGCCGCG ACAACTGGGC GGATTTCACG GCGCTGCTGA AGCGCCTAAA GCCCGACGTG CAGATCCTGA GCGAGCTGTG GACGCCCCTC TTCACCACCG ACTACTCAGC TCAAATCGGC AAGATACTGG ATCTAAAGCC CGACCTCGTA TACACATCCT TCTGGGGACC CGACCTCGCC AACTTCGTCC AACAAGCGTC GGCGAGGGGG CTCTTCAAGG TGACCACCGT AGCCTTTACA CGGGGAGAGT CCATGCTACA GGATCTAAAG GGGTCTATGC CGCCCGGCCA GATAGTACAG GCGCCCCACT ACTTCGAGTA TCCGGACCCA AGACTCAACC TCCTGAACCG GGAGATAGCC GGCGAGTATA GGAGACGCTA CGGGTCGTGG CCTCCCTACC CGGCGTACCA CATGGCAAAC GCCATCCTCG GCGTGAAATA CGCGTACGAG GCGGCGGCCG CCGTATACGG CGTAGACTGG CCGGACGTGG GGCTGGTGGC CAAGGTCTTC GAAAGGCTGG CCTACCCGTC TCCAGGCGAC TACATCATGA TGACGCCTGT ACACAACGCC GCGAAGGGCG TGGTTGTGGG GACCACGGCA GAGGTCCAGG GATACGACTT CAGACTCCTA AGGCCTTACA GATATATGCC GCCGGCTGAG ATAACCCCAA CGTGGCCTAG CGAGGAGTGG TATAAGCAGA TAGGCTAA
|
Protein sequence | MLRRDLLKIG GGFIVGLAAG YGIGKFFQPA TVEVVKPGGT ETIKAATTTT ATKARPKTFK LAVVAYQSGA ASVFGVPAVN MAKLLVDRIN AGGGINGVPV ELVVRDEAGG PDQMVALYRQ LTQQEGVDAY VGLISSADCL AVAPVAEQLG TALTVFFDCA TKQLVDKGIM KKVTFRTATT TAQDNVALVK YLLEVKPDFK TVVGINQDYA YGRDNWADFT ALLKRLKPDV QILSELWTPL FTTDYSAQIG KILDLKPDLV YTSFWGPDLA NFVQQASARG LFKVTTVAFT RGESMLQDLK GSMPPGQIVQ APHYFEYPDP RLNLLNREIA GEYRRRYGSW PPYPAYHMAN AILGVKYAYE AAAAVYGVDW PDVGLVAKVF ERLAYPSPGD YIMMTPVHNA AKGVVVGTTA EVQGYDFRLL RPYRYMPPAE ITPTWPSEEW YKQIG
|
| |