| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1235 |
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| Symbol | |
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| ID | 6166104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1111886 |
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| End bp | 1113223 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641668385 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001794608 |
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| Protein GI | 171185689 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAGGA GGGATCTGCT GAAGATAGGC GGCGGCTTCA TAGTTGGTCT CGCCGCCGGC
TACGGAATCG GCAAGTTTTT CCAGCCCGCC ACGGTGGAGG TGGTGAAGCC GGGCGGCACC
GAGACCATCA AGGCCGCCAC GACCACCACG GCAACAAAGG CGCGGCCAAA GACGTTTAAA
CTTGCGGTTG TGGCTTATCA ATCCGGAGCC GCCTCTGTCT TCGGAGTTCC AGCCGTCAAC
ATGGCTAAGC TCTTAGTCGA TAGGATAAAC GCCGGAGGCG GCATAAACGG GGTCCCCGTG
GAGCTGGTGG TTAGAGACGA GGCTGGGGGG CCTGACCAGA TGGTGGCCTT GTACAGACAA
CTCACTCAGC AGGAGGGCGT CGACGCCTAT GTGGGCCTCA TCTCCAGCGC CGACTGCCTC
GCAGTGGCGC CTGTGGCGGA GCAACTTGGG ACTGCCCTCA CTGTGTTTTT CGACTGCGCC
ACGAAGCAGC TGGTGGATAA GGGCATCATG AAGAAGGTCA CCTTTAGAAC CGCCACGACC
ACCGCCCAAG ACAACGTGGC GCTTGTGAAG TACCTGCTGG AGGTGAAGCC GGATTTCAAG
ACCGTTGTTG GGATTAACCA GGACTACGCC TACGGCCGCG ACAACTGGGC GGATTTCACG
GCGCTGCTGA AGCGCCTAAA GCCCGACGTG CAGATCCTGA GCGAGCTGTG GACGCCCCTC
TTCACCACCG ACTACTCAGC TCAAATCGGC AAGATACTGG ATCTAAAGCC CGACCTCGTA
TACACATCCT TCTGGGGACC CGACCTCGCC AACTTCGTCC AACAAGCGTC GGCGAGGGGG
CTCTTCAAGG TGACCACCGT AGCCTTTACA CGGGGAGAGT CCATGCTACA GGATCTAAAG
GGGTCTATGC CGCCCGGCCA GATAGTACAG GCGCCCCACT ACTTCGAGTA TCCGGACCCA
AGACTCAACC TCCTGAACCG GGAGATAGCC GGCGAGTATA GGAGACGCTA CGGGTCGTGG
CCTCCCTACC CGGCGTACCA CATGGCAAAC GCCATCCTCG GCGTGAAATA CGCGTACGAG
GCGGCGGCCG CCGTATACGG CGTAGACTGG CCGGACGTGG GGCTGGTGGC CAAGGTCTTC
GAAAGGCTGG CCTACCCGTC TCCAGGCGAC TACATCATGA TGACGCCTGT ACACAACGCC
GCGAAGGGCG TGGTTGTGGG GACCACGGCA GAGGTCCAGG GATACGACTT CAGACTCCTA
AGGCCTTACA GATATATGCC GCCGGCTGAG ATAACCCCAA CGTGGCCTAG CGAGGAGTGG
TATAAGCAGA TAGGCTAA
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| Protein sequence | MLRRDLLKIG GGFIVGLAAG YGIGKFFQPA TVEVVKPGGT ETIKAATTTT ATKARPKTFK
LAVVAYQSGA ASVFGVPAVN MAKLLVDRIN AGGGINGVPV ELVVRDEAGG PDQMVALYRQ
LTQQEGVDAY VGLISSADCL AVAPVAEQLG TALTVFFDCA TKQLVDKGIM KKVTFRTATT
TAQDNVALVK YLLEVKPDFK TVVGINQDYA YGRDNWADFT ALLKRLKPDV QILSELWTPL
FTTDYSAQIG KILDLKPDLV YTSFWGPDLA NFVQQASARG LFKVTTVAFT RGESMLQDLK
GSMPPGQIVQ APHYFEYPDP RLNLLNREIA GEYRRRYGSW PPYPAYHMAN AILGVKYAYE
AAAAVYGVDW PDVGLVAKVF ERLAYPSPGD YIMMTPVHNA AKGVVVGTTA EVQGYDFRLL
RPYRYMPPAE ITPTWPSEEW YKQIG
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