| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1155 |
|---|
| Symbol | |
|---|
| ID | 6166112 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1047739 |
|---|
| End bp | 1048816 |
|---|
| Gene Length | 1078 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 642485784 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000220761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000080413 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGG TCGTTCTCAC GGTTGTTGGA AAGGTGATTG AGCCTAACAA GGGCAAGACC
CTTGAGCTCA ACAGAGCTCT TGAAGAGTAC CTCAAGTTGG TTAGATGGTA TGTGGGCTTC
GGCATCACGT CGAAGACGAA GCTTCACGAG CTAACGTATG AGGAAGCCAA AAAGAGGTTT
AGCCTAAACA CTGCGCTGAT ACAGACTGCG AGGGACAAGG CCGTTGAAAT TCTCAAGAGC
TTTAATAAAC ATAAGGCAAA GGGCAGAGCC AAGGCTGATA GGCCAACGGT TAAGAGGGTA
TCTATTCGTC TAGATAGGAG GGCGTTCAAG CTCGATAAGT CCAGCACTAA TGCTAACTCC
TTACTGGCTT GTCGTTAGCT TGAGAAGAGG TGTTAGGATA GCGCTACCAC TAGCTTTCGG
CAACAGACAG AAACAGTTCA TTGAGGAGAC CCTGCAGGGG CTGTGGGAAC TCGACAGTGT
GGAGCTGGTT AAGAGAGACG GCGTTTGGTT CGCTCACTTC AAGATTAAGA AGAACGTTGT
CACCTACGGT GCTGAGGAGG CGAAGACGCT CATAGGCGTA GACCTCGGCG AGTGGAACGC
AGTTGCGGCC GTGGCCATAT CGAGGGACAG CCCGAGCAAG CCAATGAGGG GGCAGTTCTG
GGGTGGACAA AGGATTAGGT TTGTGCGCGG CAAATACGCT CACATTAGGC GTAGCCTGCA
GAGAAAGAAT AGACTTGACC TGGTTAAGAG GATTGGCAGT AAGGAGGGCA GAACAGTCAA
TCAGATGCTC CACGAAATAG CTAAGGGGGT TGTTGAGTAT GCCAAGCAGT TCCCCAAACC
AGTCATCGTC ATGGAGGACT TAGAGGGGAT TAGAGATAGG ATTAGTGGAA GCAACAAACT
ACTGAATAGG AGGTTGCACT CGTGGAGCTT TAGGAAGCTC CAGAAGTACA TTGAGTACAA
AGCGCTCCTC AGCGGAATAC CGATTGTGTA CGTAAAGCCG AAGAACACCA GTAGAACATG
CCATAGGTGC AGATTCGCAG CTGATGAAGT GAAAGGTAGA GGTTTCAAAC CCGGATAA
|
|---|
| Protein sequence | |
|---|
| |