| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1152 |
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| Symbol | |
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| ID | 6166036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1043300 |
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| End bp | 1045567 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641668303 |
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| Product | CRISPR-associated Csm1 family protein |
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| Protein accession | YP_001794528 |
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| Protein GI | 171185609 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02578] CRISPR-associated protein, Csm1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00402598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000176122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGGCT ATAGGGAGTA CGTAGTTGCG GCCCTCCTCC ACGACGTTGG GAAGCTCATA
AGGAGGGCGA AGCTGTGCCG TGGGGAGCCG GCTAGGCGCC ACGTGGAGGA GAGCGCGGAT
TTCGTAGACG TCGTCGCGCC GGCGCTTAAG GCCGCTGGGG TTGATCCGCA GGCGGTGAGG
GAGCTGGTTC TGAGGCACCA CGAGGGGGGC TGGGGGGTGG GGCCCTACGA CAGAGCCGCG
GCTCTGGAGA GGGCGCCGGG CGACGAGGAG TCGGGCCAGG GCCTGGCCAT GCCGGGGCGG
CGCGAGCACG AGATACCTCT GAGGTTGCCC ACGGGGGTGT ACGTCCCGCC GTGTCCAACG
CCGCAGAGCC TCAGCGAGAG GCTCATCCCG TCTACGGAGC CGCCGAGCCC GGAGGAGGTG
TGTAGGTGCT ACCGGAGGGC CTACGAGGAG CTGATGAGGC TGGCGGCGAA GGCGGCTCAG
AGGAGGATGG GCTTCAAGGA GCTCGTGGAG ACGCTGGTAA ACGTGCTGAA GGCGACGGCG
TCTTTTGTTC CAGCGGCTGT ATACGGCGTG AGGGAGCCAG ACACATCCCT CTACGCCCAC
TCCCTCCTGG CCGCCGCCCT CGCCTCTACG GGGGGCGAGT TCTACCTGGT GTCTATAGAC
GTGGGGAGGA TCCAGGAGTA CATCTCGAGG GCCGGCGCCA CCAAGGCCGC CATGGCCATC
CTCAGGGGGC GCTCCCTCCG GATAAACGCC CTCCAGAGGG CCGCCGTAAG GTGGCTCATA
GACAGGGTGG AGACGGCAAC ATACGCCAAC GTCCTCCTGG ACACCGGCGG GGAGGCCCTC
CTCCTCCTGC CCAAGTTCGA CCTGGCGCTC CTCGACCAGC TGGAGAGTAG AGTGCTCCGG
GAGACGGAGG GGGCCCTCGC CCTGTATGCC GCCGCGGCTG GGCCCTACAG GCTGGAGGAC
GTGGCAAGGT TCAAAGACCT CATGAGGGAG CTCTCCCAGA GGGTCACAGA GCGTAAGTTC
ATCTACCGCG ACTACGGAGC CCCGGCGGGG CCCGCCGCGA AGTGCCAGTT CTGCGGCCGG
CTGTCCGCCA AGGTGACGCC GGAGAGGCTG AAAAGCGGGG AGGTCGTCGA CCTTTGCCAC
CTCTGTAGAG ACGAGCTACA CATCGGCCGG GCCGCCCGCA ACCTGAAATA CATCGCCTTT
CTCCCCAGGG GGGCACTGCC GCCCGGCTTG GCGGGGGCCG AGCGCGGGGA TGACACGGCT
GTGGTGAACA TTCTGGACTA CGCCGTGGTC TTCAGCGGCC AGATGTCCAA GATGCCCCCC
GCCTCCCACG CCGTCTACGC CACCAACAGG AGGGATTTCA TCCTCGACGC CGACGGGCCG
GCGTACGGCA TGTGGTTCAC CAACACCCAC ATCTACTACA GGGAGGGCGA GGACTCCTCC
CTCGACGCGG CCGGGAGGTA CGCCGCCTTC GTCAAGATGG ACGCCAACAG TATGGGGAGG
CTGAAGGAGG CCGCCTCGCG GACCCCCTCG GCGCTGATCA CCTTCTCCCT CGCCGTCTCC
ACCGCCTACG AGCTCTACCC AGCCCTCCTT GCGGACGAGA GGTACCGCGA GGTGCCCATC
TTTGTGATCT ACGCGGGCGG CGACGATGCG GTGCTGGCCG GCAACCTCGA GGCGCTTCGG
TACGCCGCCA GCGTGGCGAC CTACGCCGAG AAGTGGGGCT TCAAGACGGC GATTGGCGCC
AAGATAGACA AGCCTCAGTA CCCCATCTAC TTCGCCTTCG CAGACACCGA GGAAAGGCTA
GAGAGGGCGA AGGGGATAGA CAGGGGGCGG AGCATCGCCG TGTTGATAGC GGAGCCCGTC
ACGATATACG AAGAGGCCGC GGAGCTCGAG AATGACTTGG AAAAAATCCC CAGATACAGG
GAGGACGAGG AGACACGGCG CATGGGGGCC TTCGAGCGGA AGGTGTACGA GAGGCTCTTC
GCCGCGTACG CCACCGCTGC CGTGGACGGC AAAGTGGACA AGAGGGTGGT CAAGAGGGCG
CTGGCGAAGA TCGCCGTGGA GCTGGTCTAC ATGCTCAAGA GGCGCGAGGG GGATAAGGAG
ACCACGGGGG TGCTTGAGGA GGTGGCTGGG CCTCTGTTCG CCAGCGCGGA GGGGGTTGGG
TCCTTCTTCG CCGATCTAAT GGCGGGGAAA GGGCGTTTGG ACGAGCTGAG GCGCGCTGTG
CTCCGGCTGT ATCTCCACCA CATCGCGCTG GCGTGGGCTC CCGAATGA
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| Protein sequence | MSGYREYVVA ALLHDVGKLI RRAKLCRGEP ARRHVEESAD FVDVVAPALK AAGVDPQAVR
ELVLRHHEGG WGVGPYDRAA ALERAPGDEE SGQGLAMPGR REHEIPLRLP TGVYVPPCPT
PQSLSERLIP STEPPSPEEV CRCYRRAYEE LMRLAAKAAQ RRMGFKELVE TLVNVLKATA
SFVPAAVYGV REPDTSLYAH SLLAAALAST GGEFYLVSID VGRIQEYISR AGATKAAMAI
LRGRSLRINA LQRAAVRWLI DRVETATYAN VLLDTGGEAL LLLPKFDLAL LDQLESRVLR
ETEGALALYA AAAGPYRLED VARFKDLMRE LSQRVTERKF IYRDYGAPAG PAAKCQFCGR
LSAKVTPERL KSGEVVDLCH LCRDELHIGR AARNLKYIAF LPRGALPPGL AGAERGDDTA
VVNILDYAVV FSGQMSKMPP ASHAVYATNR RDFILDADGP AYGMWFTNTH IYYREGEDSS
LDAAGRYAAF VKMDANSMGR LKEAASRTPS ALITFSLAVS TAYELYPALL ADERYREVPI
FVIYAGGDDA VLAGNLEALR YAASVATYAE KWGFKTAIGA KIDKPQYPIY FAFADTEERL
ERAKGIDRGR SIAVLIAEPV TIYEEAAELE NDLEKIPRYR EDEETRRMGA FERKVYERLF
AAYATAAVDG KVDKRVVKRA LAKIAVELVY MLKRREGDKE TTGVLEEVAG PLFASAEGVG
SFFADLMAGK GRLDELRRAV LRLYLHHIAL AWAPE
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