| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1149 |
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| Symbol | |
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| ID | 6166025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1040582 |
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| End bp | 1041505 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641668300 |
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| Product | CRISPR-associated RAMP Csm3 family protein |
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| Protein accession | YP_001794525 |
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| Protein GI | 171185606 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.19173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000019358 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAGC AGTACCCGCA GGCTCGGCTG AAGCTGTCCA ACCTGGTTAA GATTAACTTC
AAGCTCAGGG CGTCCGGCCT CTTGATTAGG AGTGGGAAGA CGAAGGAGGT GCTGGGGGCC
GCCGACATAC AGCCCATGTC GATACAGCGG GTTTACAGGC TCAACAACGC CGAGCATCCC
CTGACGGTTC CGTATATCCC CGCCTCCTCT CTCAAGGGGA GGGCTAGGTC TCTGCTGGAG
GCGGCGCTGG GCCTGCCTCT GCACACCACC GACGGGAAGA TCTACCTACA CATGAGGATT
GTCCAGAAGA ACATCATGGA CGAGGACCCG TTCTGCCCCG TGGATAACAT CTTCGGGACG
CCCTCAATCG CCTTTAGGGA GCTGGACGAG AGGTACCGCT ACCTCTTCGA GTGCTGGGCG
CCTAGCCGCG CAATATTTCG CGACCTCTTC CCCTCCGAGG GTTATGTGAA GAGTCTGTGC
GACGCGAAGG GTGGCTGCGC CTACGTGTCG CTTGAGGACT TCCTTGAGGA GAAGAACGAG
AACAGGATCG ACAGGGTCAC GAGCACAGCC GACCCCCGCG AGATCTTGAG GCTGAGGCCT
GGGGTGGAGT TCGACGGGTC TATCACCGTG TTGGTGTACG ACATCGACCT GAAGCCGAAG
GAGGATTGTG TTAAGTATAC CAAGGTAGAC GAGATTAAGA GGGGGACGCC GCCTGTTAAG
TACTACCTCG ACATGTTGAT CAAGTCGCTG CGTCTTGTGG AGGAGACCTA CCTGGGGGCC
TCGGGCACCA GGGGCTACGG CCAGGTGGAG TTCACCAACC TCGAGGCCAA GCTGCTGGAC
GCCTTGACCT TCAGCGAGCT GAGGAGGGCT GAGGCGCCCT CTCTGGCCAA GCTGGGCGAG
GAGGTGTCTC AGTGGTGGCA ATGA
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| Protein sequence | MSEQYPQARL KLSNLVKINF KLRASGLLIR SGKTKEVLGA ADIQPMSIQR VYRLNNAEHP
LTVPYIPASS LKGRARSLLE AALGLPLHTT DGKIYLHMRI VQKNIMDEDP FCPVDNIFGT
PSIAFRELDE RYRYLFECWA PSRAIFRDLF PSEGYVKSLC DAKGGCAYVS LEDFLEEKNE
NRIDRVTSTA DPREILRLRP GVEFDGSITV LVYDIDLKPK EDCVKYTKVD EIKRGTPPVK
YYLDMLIKSL RLVEETYLGA SGTRGYGQVE FTNLEAKLLD ALTFSELRRA EAPSLAKLGE
EVSQWWQ
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