| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1145 |
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| Symbol | |
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| ID | 6165711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1034039 |
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| End bp | 1035640 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641668296 |
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| Product | AAA ATPase |
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| Protein accession | YP_001794521 |
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| Protein GI | 171185602 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00264126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000264348 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTTGTG GTTTTGTGTC GCGTCAGTTT AGGAGTTCTG TGAGTTCGGA GGAGGCTGTT
GCCTATGCTC TTCTGGCGTG TGAGGCGCCG GTGGGGTCGT ATCTGGTGGT TGAGGGGGGT
GGGAGGAGGT GGCTGGCCAA AGTGAGGGAG GTCTATCTGG AGGACATCTA CTCCGTTGCC
AAGACTCCCG TCCTCACGCC GGAGCAGGAG CTGGCTGTGC CGCTCAGGCT GGGGCCGGCT
GTGGCGGTTT TGGAGCTGGT GGCGGAGTGC TCTGGGGGCT CCTGCGGCCC GCCTGCCTCG
CCTGTGCCTA TACATGCCGA GGTGAGGGCA CCGGGGCCGG GGGAGGTGGG GCTTATGCTG
TCGCTTCCGC GGCAGGGCAT CCTGCTGGGG GACCTGGCCC TTCCCTCGGG GCAGGCGCTG
GGGGGCGAGC CTGTGTATCT GCCGCTGGAG GCGCTGAGGC ACCACCTCCT GGTGGTGGGC
ACCACGGGGT CTGGGAAGAC GGTGTTTGTC AAGGAGCTCG CCCTGCAACT GGCGGGGGCT
GGGCAGAACG TGGTTGCGCT CGACGCTGTG GGGCACTTCT ACCACCTGGC CTACAACGGC
CTCCCCGTCA AAGTCCTGCT CCCCGTGACG AGGAGGCTCG CCAGGAGGGG GCCCAGGGCA
GTGGCTAGGC GGGCCGCCGC GAGGGCTCTC TGGGGGCGGA GGGGGAGGTT CAAGGCGAGG
GTCTTCCGGA GGGGGAGGGC CCTCTCCCGC ATAGAGCTGG AGATAGCGGA GCCCGGCGGG
GCGAGGCTGG AGGTCTTCCC CTGGGCCCTC AAGAGCCCCT CGGTGCTCCC TCAGTTGCAC
AGAGCAATGC CCATCTTGAC CCAGCAGGCC CGTATATTCT ACAGGAGGGT CCTCCAGAAG
GCCGTCGAGA AGGCCGGCTC CCCCGCGGCC GAGCCCCTGT TCCAGTGGCT CACCTCGCCC
TCAGATGACG TCCAGAGGGG GAGGCCGCTG GTCAACTACG AGAAGCTGGG AAACGACCTG
GGCCTCCACG TGAGCACCAT GGAGAACATC GTGAGGGCCG TCCTGGCCCT GGTGGAGACC
GAGCTCGTGG ATGTAGAGAC GGCGGACGGC GCCAAGGTGG GCGAGCCGGA CTACGGGAGG
GCCCTCTCGG GCTACGCCGT AGTCGACCTC TCCGAGCTCA ACACGCACCA ACAGCGGCTG
GTGGTCTACC GGGTGCTGGA CGCCGTATAC AGGGTGGCCC GCCCCACCAC CGCCGTCTTG
ATAGACGAGG CGCACCTCTT CTTCCCACAG ACGCGCAACG AGGACGAGCA GGCGTTTATA
GAGGCCCACC TCACCCGCCT CACGAGGCTG GGGAGGGCCA GGGGGATAGG CGTGGTCTTC
GCCACGCACA TGCCGGACGA CCTAAACGAC GTGGTCCTCC AGCTGGCCAA CACCAAGGTG
GTGCTACGGA GCGATCTGAA GGTGTTGGAG AAGCTGGGGG TCCCCCCGGG AGACAGGAGG
TTCGTGGCCT ACGCGGAGAG GGGCCTCGCC TACGTCGCCA GCTACGCCTA CCGCTACCCC
CTCTACGTCA AGGTGAGGAA AACCGCCGTC CACTTCGGCT GA
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| Protein sequence | MSCGFVSRQF RSSVSSEEAV AYALLACEAP VGSYLVVEGG GRRWLAKVRE VYLEDIYSVA
KTPVLTPEQE LAVPLRLGPA VAVLELVAEC SGGSCGPPAS PVPIHAEVRA PGPGEVGLML
SLPRQGILLG DLALPSGQAL GGEPVYLPLE ALRHHLLVVG TTGSGKTVFV KELALQLAGA
GQNVVALDAV GHFYHLAYNG LPVKVLLPVT RRLARRGPRA VARRAAARAL WGRRGRFKAR
VFRRGRALSR IELEIAEPGG ARLEVFPWAL KSPSVLPQLH RAMPILTQQA RIFYRRVLQK
AVEKAGSPAA EPLFQWLTSP SDDVQRGRPL VNYEKLGNDL GLHVSTMENI VRAVLALVET
ELVDVETADG AKVGEPDYGR ALSGYAVVDL SELNTHQQRL VVYRVLDAVY RVARPTTAVL
IDEAHLFFPQ TRNEDEQAFI EAHLTRLTRL GRARGIGVVF ATHMPDDLND VVLQLANTKV
VLRSDLKVLE KLGVPPGDRR FVAYAERGLA YVASYAYRYP LYVKVRKTAV HFG
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