| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1140 |
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| Symbol | |
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| ID | 6165863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1028728 |
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| End bp | 1029600 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641668291 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001794516 |
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| Protein GI | 171185597 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.511238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000356789 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCGCAT ACGGCGCCAG GATAAGGGCT AGGAAGGGCC TCCTCCTCGT GGAGACAAAG
GAGGGCGCCA GGGAGTACCC CCTACACGAG GTAGACGAGG TCCTCCTACT CACCGGCGGC
ATATCCATAA CGACGAGGGC GCTCAGGGCC CTCCTCGCCG CCGGGGCCAC AGTCGCCGTC
TTCAGCCCCC GCGGGGAGCC CCTGGGCATA TTCATGAAGC CCATCGGAGA CGCCACGGGG
GCCAAGAGGA GGTGCCAGTA CAAGGCGGCG GAGGACGGCA GAGGGCTACA GTACGCCAAG
AGCTGGGTCT TCAAGAAGAT GCTGGGCCAG AGAGACAACA TCAAGGCCTG GCGCCGCCGC
CTAAGAGGCT ACAGCCAATA CGCCGAGTCC CTAGCCAAGG CCCTACAGGC GCTGAGAGAC
GCCGCCTCCC CCCACGCTGT CTTGGAGGCC GAGGCGGCGG CCGCCGAGGC CTACTGGGCC
GCCTACAGGG AGGTCACGGG GTTCCCCGGC AGAGACCAGG AGGGGAGAGA CCCCGTCAAC
GCCGGCCTAA ACTACGGCTA CGGGATCTTG AAGGCCCTGG TCTACAAATC CCTGATCCTC
GCCGGGCTGG ACCCATACGT CGGCTTCCTC CACGTAGACA AATCCGGGAG GCCCTCCCTA
GCGCTGGACT TCATGGAGCA GTGGAGGCCC CGCGTCGACG CCGTCGTGGC CAAGATGGCG
GACAAGCTGG AGTCCGAGGG CGGCCTACTC ACCCGCCGGT CCCGCCTGGA GCTGGCCGCC
GCCGTCCTGG AGGAGCTCCA CGCCGCCAAG AGGCCCCTCT CCGCCGAGAT CCACAGAGAG
GCCAGAGCTC TGGCGCGCTC CATATGTACA TAA
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| Protein sequence | MAAYGARIRA RKGLLLVETK EGAREYPLHE VDEVLLLTGG ISITTRALRA LLAAGATVAV
FSPRGEPLGI FMKPIGDATG AKRRCQYKAA EDGRGLQYAK SWVFKKMLGQ RDNIKAWRRR
LRGYSQYAES LAKALQALRD AASPHAVLEA EAAAAEAYWA AYREVTGFPG RDQEGRDPVN
AGLNYGYGIL KALVYKSLIL AGLDPYVGFL HVDKSGRPSL ALDFMEQWRP RVDAVVAKMA
DKLESEGGLL TRRSRLELAA AVLEELHAAK RPLSAEIHRE ARALARSICT
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