| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1138 |
|---|
| Symbol | |
|---|
| ID | 6165746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1027204 |
|---|
| End bp | 1027875 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641668289 |
|---|
| Product | CRISPR-associated DNA-binding protein |
|---|
| Protein accession | YP_001794514 |
|---|
| Protein GI | 171185595 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01884] CRISPR locus-related DNA-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.45264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000288423 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAAAA CCTTTTTCGT CTACAAGGTT TATATCTCGG GTTGCAGGTG GCTTGCAATG
AGGATGGGCA TCACGGTGGG GTTTGAGCAC AGGTTCGCGG TGCGGGCTCT CGCCAAGCTG
GGGCCGGCTG ACGAGTACAT CTTTCTCTAC GCCTACACCG GCAGGGGGGA GGACTCGAGG
TCGGAGAGCA CCGTGAGGGA GCTGATAGCC GCTTTCGGGA GGGGGACCGG GTTTAGGGTG
GATCTGACCA AGCCCGGCGA GGCGCTGGAG CAGATCTACG GCCTGGGGCT GGAGAGGGTC
GTGCTGGCGG GCGGTCCTAG GTTGCTGGTG CTCCTCGCCC TGCTGGCATC CCTCCTCCGG
AGGTCCGAGG TGTACGTCCT CCCGGAGTAC TCGGCGGAGC CCCTGGATTT GACCCCCCTC
ACCGCGTTCT GCGACCTCTG CAGGCTCAGC CCGGCGAAGC TGGGCGTAGT GGCTTCGGTA
AGCGGGAGAG TGGGGATAGA CGACGTGGCG CAGTTGGTGG GCCGGGACTC GACGACTGTT
GCGAGGTACC TCAAGGACCT GAGCGAGGCG GGGGTTGTGA AGTCCCTCGG CGGCAGGAGG
AGGGAGTACT TCGTCGACCC GCTCCTCACC ACAGTTGCTC GTCTTATGCA AAACAGAGCC
GGGTCTTTGT AG
|
|---|
| Protein sequence | MVKTFFVYKV YISGCRWLAM RMGITVGFEH RFAVRALAKL GPADEYIFLY AYTGRGEDSR
SESTVRELIA AFGRGTGFRV DLTKPGEALE QIYGLGLERV VLAGGPRLLV LLALLASLLR
RSEVYVLPEY SAEPLDLTPL TAFCDLCRLS PAKLGVVASV SGRVGIDDVA QLVGRDSTTV
ARYLKDLSEA GVVKSLGGRR REYFVDPLLT TVARLMQNRA GSL
|
|---|
| |