Gene Tneu_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1106 
Symbol 
ID6165621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp988630 
End bp989748 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content63% 
IMG OID641668258 
Producthypothetical protein 
Protein accessionYP_001794483 
Protein GI171185564 
COG category[S] Function unknown 
COG ID[COG4938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0316487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000249477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGGTGG CCATCAGAGA CTTCAAAAGC GTCGCACACG CCGAGCTGGA GATAGCCCCC 
CTCACCATAC TGATAGGCCC CCCGGCCGGC GGCAAGTCAA ACATACTAGA CGCCCTCGCC
GTCTTGGGCT ACCCCGCCAG GCTCCTACGC CTAGACGAGG AATACGGCGG CGCTAAAAAC
GCCCTGGAGC CGTTGGGACT GGTTGCCAGG TACACGGACC CCAGAGCCCT CTTCCGAAAC
TACGACCTAA CCAAGACCCC AACCGTGGAG ACGCCCAAAT ACTCCGTCTC CATCCACTAC
AGGCGGGGCC TACAGGTGAA GGCAGGAGAC GCGACAGCCG AGATAAATAT GGAGCACCTC
ACCGGTGAGG GCGACCTGGC CCCCCTCCAG GACATCCTCG TGGAGACCCG CCTCTACGGA
TACGACAGAT ACGGCCTGCC GGCCACGGGG TGCCGGCAGG GCCACTGCGG CTTCTACGAC
TACCTAACCA CCCAGGTGAG GTTCACCCCC CACAACATCC TAAGCGACCT CGGCTGGAAC
ATACGCCGAG TCATCAGGTA CACCCCAGAC GTCGTGAGGG AGATCAACGA AGCGCTTTCG
GAAAGGCTCG GCGAGAAGAT AGAGCTCAAG GTGTCCAAGG ACGGCGCCAT CGCCATCTAC
GACTACGACT ACGAGGTTAC GTCGCCCTCC GTATCCGAGG CACTATTCCG GCTGATCTAC
TACCTAGCCG CTCTGAGGTC CGCCGCCAGC TACGCCAAGC TCCACGGCCT AGAGGGGCGC
CTCGTCGCCG CGCTGGAGGA GCCCGAGGCG CACATATTCC CCTTCCTCCT GGACCTGCTC
GCCGACCACA TCGCCCAGGC CGCCTCCACC GTCCACGTGG TGCTCGCCAC CCACAACCCA
CTCCTCGTCT CAGCCCTATG GGACCGCGCC GCCGGAGTCA AAACATACTA CATCCACCGC
GACAAACACG GCGCCACAAC CGCCGCCGAA ATAGACATAG AGAAAATGGC ACAGGACCTG
GCCACCGCCG AAGACATCAT GCTCACGCCC CCCGCCGAAA TCCTCGCCAA ATACGCCAAA
AGCCCCGCGA CGCCAAGCGC CACGCCAACC GCCGCCTAG
 
Protein sequence
MRVAIRDFKS VAHAELEIAP LTILIGPPAG GKSNILDALA VLGYPARLLR LDEEYGGAKN 
ALEPLGLVAR YTDPRALFRN YDLTKTPTVE TPKYSVSIHY RRGLQVKAGD ATAEINMEHL
TGEGDLAPLQ DILVETRLYG YDRYGLPATG CRQGHCGFYD YLTTQVRFTP HNILSDLGWN
IRRVIRYTPD VVREINEALS ERLGEKIELK VSKDGAIAIY DYDYEVTSPS VSEALFRLIY
YLAALRSAAS YAKLHGLEGR LVAALEEPEA HIFPFLLDLL ADHIAQAAST VHVVLATHNP
LLVSALWDRA AGVKTYYIHR DKHGATTAAE IDIEKMAQDL ATAEDIMLTP PAEILAKYAK
SPATPSATPT AA