| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1093 |
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| Symbol | |
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| ID | 6165585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 977897 |
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| End bp | 979183 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641668245 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001794470 |
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| Protein GI | 171185551 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000816511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00387756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTCCA GGCTCGCCTA CCTGCTCGCC GCGGTGGCGC TGGCCGTCGC CGCGGCGGCT
TTTGTACAGA CGTACTACGC GGTGCAGGCG GTGAACGACA AGCTGGCGCA GCTCCAGTCT
AGGGTGGAGG CGGTTGGGGC GGAGGTGTCG AGGGGCCTCG CGGGGGTGGA GGCCAAGCTG
TCGTCTATAA ACTCGACGGC GGCAGCCGCC TACAGGGAGG CCAAGCTGCT GAGGGAGATA
TCGGGGAGGC CCTCCGGCTT CGTGCCGGTG AGGTACGCCA GGCTCTTCTC CATACAGTAC
GAGGGCGACG TCTATATCCT GAGGGACGCC CTTGGGCGGA GGATACTCCT CCTGCCGCGG
GGCATGTCGC AGGACCTCGC CAACTACTAC AGGGCGAAGT ACAGGCCGGA CGCTGTTGTG
TACTACCCCG TCAAGAGGGC GGTCTACATG TCCTCCACCG AGGTGGCCAT GGCCTACAGG
CTGTATAAAG AGGCGGGCAG GGCGGACGTC CTTAGGTCGA TCGTGGGGAT AATGTGGGGG
AGGGAGTACC GGTGGTACCT CCCGGAGGTG GAGGCGATGC TTAACAACGG CACCATAGCC
GACGTGGGGC CGGCCTACTC GCCGGACTTC GAGAAGATCG CCTCGCTGAA GCCCGACGTG
GTGTTTGTCT TCTACTACCC CGGCCCATAC GGCACCGAGT CCGTGGTGAA GAAGCTGGAC
CAGCTGGGGA TCCCCTACGC CGTGGTTAAC GAGTTCCAGG AGCAGACGGC CCTTGGGAGA
GCCGAGTGGA TTAAGTTCAT AGCCGCCTTC TACAACGCCA CGGACGACGC CGTCAAGATC
TTCGACAGGG TGGAGGCGAG GTGGAGCTCC CTGGCATCCC TCGTGGCCGA CCTAGACAGG
CCCAGGGTGG CGTGGTTCAC CATATTCGGC GGCGTTTTGT ACCCCGCGGG GGCTGGCGTG
AGGGACCTCA TCAGGACAGC CGGCGGGAGG TACGCCTACG CCAACTACAG CAGGGTGGAC
CTCGAGGTGG TGCTGAAGCA CAAAAACGAC GTAGACGTCT TGATCTGGTC AAGCTACGGC
GTATCCAGCG TGAGGGATCT GCTCAAGGTG GAGCCGAGGC TGGCGGAGCT GAGGCCGGTG
GTGCTTGGGA GGGTCTACGC CTACAGCCCC GCCTTCTACC AGCTTGCCAA CGCCTACCCC
GAGCGGCTGC TGGAGGAGCT GGTGTGGATC ATACACCCCG AGGTGGCGCC GCCCGGCAAC
TTCACCCTCT TTGTGCATCT GCAGTGA
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| Protein sequence | MQSRLAYLLA AVALAVAAAA FVQTYYAVQA VNDKLAQLQS RVEAVGAEVS RGLAGVEAKL
SSINSTAAAA YREAKLLREI SGRPSGFVPV RYARLFSIQY EGDVYILRDA LGRRILLLPR
GMSQDLANYY RAKYRPDAVV YYPVKRAVYM SSTEVAMAYR LYKEAGRADV LRSIVGIMWG
REYRWYLPEV EAMLNNGTIA DVGPAYSPDF EKIASLKPDV VFVFYYPGPY GTESVVKKLD
QLGIPYAVVN EFQEQTALGR AEWIKFIAAF YNATDDAVKI FDRVEARWSS LASLVADLDR
PRVAWFTIFG GVLYPAGAGV RDLIRTAGGR YAYANYSRVD LEVVLKHKND VDVLIWSSYG
VSSVRDLLKV EPRLAELRPV VLGRVYAYSP AFYQLANAYP ERLLEELVWI IHPEVAPPGN
FTLFVHLQ
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