| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1091 |
|---|
| Symbol | |
|---|
| ID | 6165495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 976337 |
|---|
| End bp | 976993 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641668243 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001794468 |
|---|
| Protein GI | 171185549 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00377996 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000564642 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTAG AGTTTGACGT GGAGAAGAGG CTCGGCGGCT TTCTGCTGAG GGCTTCCGGC
AGGCTGGAGC CGGGGGTCAC CTGCGTGGTG GGGCCCAACG GCTCGGGGAA GACCACCCTC
CTCAAGATCC TGGCGGGCCT CCTCAAGCCC GACGGGGGGT GGGTTAAATA CGTGGGGGTG
TCCTCTAGGG TGTACGTGGG GGATCTCCAC GTGCCTCCGG ACGCGCCGGC GGGGGAGGTG
GTGCTGTCGG GGAGGTCTAG GTTCTCCCCC CGGCCGGTGG AGCGGGGGGA CGTGGAGGCG
GCCCGGCGGT ACATGGAGGC GCTGGGGGTG CTGGGGCTGG CGGGGCGTAG GTGGTCTACC
CTCAGCGGGG GGGAGAGGCA GCGCTTCGTC ATCGCCGCGG CGCTGGCCTC GGAGGCGGAC
CTCCTCCTCC TGGACGAGCC TCTCTCCAAC CTACACGGGG ACTGGAGGGG GAGGGCCATG
CGGGTTTTGG GGGAGTACTC CTCGGGGCGG ATCGTGGTGG TTACGACCCA CCACCTGGAC
GTGTTGGGCT GCTGCCGGTG GGTTTACGCG CTGAGGGAGG GGTCCGTGGC GTGGCGGGGG
GAGGCGTCGG GGTATAGGCC GGAGGTGGAG GAGGCGTGCC GGGGAACAAA AAATTAA
|
|---|
| Protein sequence | MYVEFDVEKR LGGFLLRASG RLEPGVTCVV GPNGSGKTTL LKILAGLLKP DGGWVKYVGV
SSRVYVGDLH VPPDAPAGEV VLSGRSRFSP RPVERGDVEA ARRYMEALGV LGLAGRRWST
LSGGERQRFV IAAALASEAD LLLLDEPLSN LHGDWRGRAM RVLGEYSSGR IVVVTTHHLD
VLGCCRWVYA LREGSVAWRG EASGYRPEVE EACRGTKN
|
|---|
| |