Gene Tneu_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1072 
Symbol 
ID6164699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp957897 
End bp958868 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content55% 
IMG OID641668224 
Producthypothetical protein 
Protein accessionYP_001794449 
Protein GI171185530 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.304238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0380408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGAGG AGGTGAGGAG GGTTTTGCTT GAGCATCCTG AGATTATTGC TGAGGCTATC 
GAGGCTAGGC CTGAGGTTCT CTACAGAGCT CTCGCCAGGC TTACGCCGTG GCAAAACCTA
GCCACCAAGG AGGACGTGAG ATCGCTGAGA GAGGAGATGC AGAAGATAGA GGAGAAGATG
GCCACCAAAG ATGACCTAAA ACACTTGGCA ACTAAAGACG ACGTCAGTAG GCTTGAGGAT
CGGCTTGAGG AGACGAGGAG AGAGATGGCC ACCAAGGAGG AGGTTAAGAC TCTTGAGGCC
AAAATGGCCA CCAAGGACGA TATAAAGGCC TTCGCCACTA AAGAGGATCT AAAGACTCTT
GAGGCTAGAG TGGCGACGAA GGAAGATCTG AAGGCTCTTG CCACGAGAGA GGAGCTGAGA
GCCCTTGAGG CCAAGATGGC CACCAAGGAC GATATAAAGG ATCTTGAAGC AAGGATGGCC
ACCAGAGAAG ACGTGAGAAG ACTTGAGGAG CAAGTGGGAG AGGTGAGAAG AGTTATGGTT
ACGAAGGATG AACATGTGGC GTTTGAAAAA CGCATCATGG CGTATGTCAA CGCGCTGGGG
GCTAGATGGG GGGTAGTTAG CGAGGATGTA TATAGAGAGG GGGTGAGGGA GCTCCTCCGC
GACGCGGGAT ACACGGTGGA GCGGTGGGTC TACTACGACG GCGAGGGCTA CGTATACGGC
TACCCGGCGG AGGTGGAGCT AGACGTCGTG GCTAAAGACG GCAAAACAAT AGCTGTAGAG
CTCACAGCCG CCCTCAAGAG GGGAGATCTC CAGTACATCA AAAAGAAGGC GGAGCTCTAC
CAGCGGACAG CCGGCAGGCC GCTGGACAGA GTGATAGTGG TGACGCCGTT TATACACGAC
AGAAACCCAG ACCTGGTCAG AGCCAAGGCA AAGGAGTACG GCATAGACAT CGTAGCCCCC
GGAGACCTCT AG
 
Protein sequence
MVEEVRRVLL EHPEIIAEAI EARPEVLYRA LARLTPWQNL ATKEDVRSLR EEMQKIEEKM 
ATKDDLKHLA TKDDVSRLED RLEETRREMA TKEEVKTLEA KMATKDDIKA FATKEDLKTL
EARVATKEDL KALATREELR ALEAKMATKD DIKDLEARMA TREDVRRLEE QVGEVRRVMV
TKDEHVAFEK RIMAYVNALG ARWGVVSEDV YREGVRELLR DAGYTVERWV YYDGEGYVYG
YPAEVELDVV AKDGKTIAVE LTAALKRGDL QYIKKKAELY QRTAGRPLDR VIVVTPFIHD
RNPDLVRAKA KEYGIDIVAP GDL