Gene Tneu_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1071 
Symbol 
ID6165078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp956823 
End bp957776 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content58% 
IMG OID641668223 
Producthypothetical protein 
Protein accessionYP_001794448 
Protein GI171185529 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.283226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0673929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGTTG CAGAGGAGGT TAGGAGGGTT TTGCTTGAGC ATCCTGAGAT TATTGCTGAG 
GCTATCGAGG CTAGGCCTGA GGTTCTCTAC AGAGCTCTCG CCAGGCTTAC GCCGTGGCAA
AACCTAGCCA CCAAGGAGGA CGTGAGATCG CTGAGAGAGG AGATGCAGAA GATAGAGGAG
AAGATGGCCA CCAAGGACGA TATAAAGGAT CTTGAAGCAA GGATGGCCAC CAGAGAAGAC
GTGAGAAGAC TTGAGGAGCA AGTGGGAGAG GTGAGAAAAG TAATGGCTAC GAAGGACGAT
CTCAAGGCCT TCGCTACAAG GGAGGACGTT AGGAGGCTTG AAGAGCAGCT GGACGAAGTG
AGGAGAGTTA TGGCTACGAA GGAGGATCTT AAGGGCCTCG CCACAAAGGA GGAGCTCAAG
GCGCTTGAGG AGAGGATGGC TACGAAGGAA GATCTGAAGG CTCTTGCCAC GAGAGAGGAG
CTGAGGGGTC TCGAGGAGAG GATGGCCACA AAGAGGGACG TGGAGGAGCT GTGGAGGGCT
ATCAACAGGC TGGAGAGGAA GCTGGACGCG CTGGGGGCCA GATGGGGGGT AATCAGCGAG
GAGGCGTTTA GGGAGGGGAT GAGGGCAATG TTGAGGGAGG CCGGGTGGTC GGTGTCTAAG
GAGGTCCTCT ACGACAGGGA GGGCTACGTA TACGGCACCC CCTCTGAGGT GGACTACGAC
GTGGTGGTCA GAGACGGGAG GCTGATAATC GTCGAGATCA CGTCCTCGCT GAAGCGGAGC
GACCTGCCCA CCATAGTGAA GAAGAGGGAG CTCTACGAGA GGGCCAGGGG GGCCAAGGTA
GCCGCCGTCT ACGTAGTCAC CCCCTACATA GACGACAGAT ACCCCGAGCG GGTAAAGGCC
ATGGCCAAAG ACCTAGGGCT GGAGGTGGTC TACCCGGCCC CACCCCAGGA GTAG
 
Protein sequence
MSVAEEVRRV LLEHPEIIAE AIEARPEVLY RALARLTPWQ NLATKEDVRS LREEMQKIEE 
KMATKDDIKD LEARMATRED VRRLEEQVGE VRKVMATKDD LKAFATREDV RRLEEQLDEV
RRVMATKEDL KGLATKEELK ALEERMATKE DLKALATREE LRGLEERMAT KRDVEELWRA
INRLERKLDA LGARWGVISE EAFREGMRAM LREAGWSVSK EVLYDREGYV YGTPSEVDYD
VVVRDGRLII VEITSSLKRS DLPTIVKKRE LYERARGAKV AAVYVVTPYI DDRYPERVKA
MAKDLGLEVV YPAPPQE