| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1062 |
|---|
| Symbol | |
|---|
| ID | 6164320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 945359 |
|---|
| End bp | 949315 |
|---|
| Gene Length | 3957 bp |
|---|
| Protein Length | 1318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641668214 |
|---|
| Product | molydopterin dinucleotide-binding region |
|---|
| Protein accession | YP_001794439 |
|---|
| Protein GI | 171185520 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.667972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.812016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGG CGGTCCTCTC TAGGAGAGAC TTCCTAAAGG CGAGCGCCGC GGCGATGGCG
GTGGGGATCG CCGCCGGCGC CTTTGTAAAA GCTCAGCTCT ACAGCGAGGT GGAGCAGGAC
CAGAACTGGT GGAGCGGCGC CACCGGCAAG TTCAAGGGGT ACCCAACCCT ATACCGCGTC
CCGCCCACTG GCGGGGTGAA GGAGGTGGGC GGCTCCTTCG AGGTGAGCAC CCCCGACGGG
CTGAAGACCA TATCTCTGAA GTGGTGGGAG AACTGGATAG ACTGGCGGGA GTACGACGCT
AAGGCGTGGC CTAAGCCCAG GGAGAGGAGG TACTTCATAG CCACCGGCGG AGTCTGCGGC
GGGTGCGAGG TGAGTTGCCA CTTCGTGGTG TGGATAGACA AAGACACGAG ACTGGCGCGG
AAGGTAATGG TCAACCCGCT CAACAAGAGC AACTGGGGGC TCTGCGTGCG CGGCCAGAGC
GCCGCCGCCG CGGCGGCCCA CCCAGACAGG ATAGTGTATA TACTAAGCAA GATAGACCCC
AAGACGGGCA AGAGGGTGGG CGCCAGGGGC GACGACAACT TCGTTAGGGT GACCTACGAC
GAGTCTCTCG AAATCGTATC TGACTACTAC GCAAAAGCCT TCTACGAGTA CTTCGTCGAG
GGCAACCCCA TAGGCTCGAC GAGGTTGCAC TGGCACGAGG GCAGACCTCT ACAGACCGGC
TACTTCACCC ACCACCCCTG GGTTAAAGAC TGGGAGCAAC AACACGCCTT CGGTAGCCAC
ACCAACCTGT GTTCGGCTGG AGCCCGCCTA GGCAACAACC TCTGGATCGC CATGGACCGC
AACTCGCCGG ATTACTACAG GGCGAAGGTG GTGGTCAATC ACGGCATGGG CCACCTGGGA
GACGCTGCTC ACTTCCTAAT GTCCCACGGC CCTAGGCTGG CGGTGGCGAG GTTAAAGGGG
ACTAAGATCA TCTCGGTGAG GGAGAAGTAC TTCCACACGG AGCTTCTAGC CGACTACTGG
GTGACTCCGT GGCCTGGCAC CGAGGCGTGG CTGTGGGCGG CTGTGGCAAA CGTCCTCATC
AACGAGCTAA ACGCGGTGGA TTGGGAGTTC GTCAGGAGGT GGTGGAACTG GGACTGGTTC
CTGAGGGATA GGAAGCTGCT GCAACACCTC TACAACATGG GCTACATAAA GACGCTCCCG
CCCGACGACA TATACGGCGT GACGGAAGAC GGCGTGGTTT ACATAAAGGA CTACGCCAAG
GCGTGGGACT ACTTCCAGAA GTTCCTAAGG GAGTACTTCG CGAACTTCAC CCCCGAATAC
GCCGCGTGGG TCACGAGGCT AAACGCCAAG ACGCCGCCGC CCGACCCGTT GAGTGAGGAG
GAGGTCAGAA ACGCCGCCGC CTTGATACGC GCCATAGCTA AAGAAGTCGC CGCGGCGGGC
AAGGCGCTGT CTATAAACCA GTGGCGCGGC CCCGGCCAGA CCTACGGCGG GTGGATGCTG
GCGAGGATGT TCTTCTTACT AATAGCGCTG ACAGGCGCCG TCGGCACTGT GGGAGGCACC
GGCGCGGCCT CGTGGCACAA CACCGACTTC GTGTACTACT GGTGGCAGGG CACCCTCGCG
GCCCAGGTGC TGAAGAGGAA GCTAGACGGA CCCGCCGTCT GGAACATAAA CATGATAGCG
CCAGAGGAGA GCGCCTTCGG GTCCTACGAC CCCACCAACA CCATACCCTT CAGGATGTAC
GACCCCGAGT GGCAGGAGTA CTGGAGAAGC CTCGGCTTCG CGGTGCCCGA CAGAGTGTAT
GTATGGATTT CCCGTGTGGT GAATCCGCCA GCCACATATC AAGCCGGCGC CCAGTGGGTG
AGGTTCTTCG CAAACCCAGA AAAGGTGGAG CTGAAGGTAC ACATGACCCA GTTCTGGAAC
GAGACCTGCT ACTTCTCAGA CCTCTGCATA TCTGAGGGGC ACTGGTTCGA GCGCCACGAC
CCCCAGCCGG CCGCCCCCGG CATATATGCG CCAGATAGGT GGTTCAGCGT GCGGTGGCCC
TCCTACGTCA TATTCTTGAT GAGGATGGGC TGGAGGCCGA AGGACCCGCA CAGATCTGCG
CTTGAGGCCC ACCAGCAGAT AGGCCTTGGC GACGTCATCT CGCCGGAGGA GTGGTATCTG
GAGCTGGCCT GGAGAACCAT AGCGAAGACT GTGCTTATGG CTAAGAAAAA CGGGAAGCCA
GTGGAGGATC TGCTAAGGGA TAAGGAGGTG GACTACCTGG GGGCCAAGGT GAAGATACCC
AGCCTCGCCG ACAGGCTGGC CTTCCTAATC GATGTCAACA GAGGCAAGCG CTACGCGGCG
CAGCTCGGCA TTCCGCCCGA GCAGTTGCCC GAGAAGCTGA TTAGGGACCT CTACGACGGG
AAGATCACCT ACGAGCAGTT CGTAAACGAC ATTAGGAAGC AGGTGGTGCC GACGATGTGG
GATATGTACA ACTGGGCTGT ATACGCCTAC TCGCCCACCG TCGTCAAGTT CTCAAAGGAC
AAAGGCCTGG AGCCCGTGGA GGCGCTGGAG CTGTACCAGT TCGTCATACA CGACACTAAC
GTATACGCCG AGAAGACCTA CCTAAAGAAG GTGCCGAGGG AGCAGGTGGC TAGGGTAGAC
CCCATCACGA AGCTGGCCTA CGACAAGGCG GGGGGCATCG CCGGCGTAGA AATCGACGGC
GAGATATACC TCGGGTTCAA CGTCCTCGGC ACAGTCACCC ACACTCTGAA GCTTGAGTGG
TACAACCCGG CCATGGCCGA GCAGGAGCTG AGAGAGGTGT CTATACCCAT TATCCCATTG
GAGGCGGACC TAAAGAAGGC CATTGCAGGT GACTTGGGGA CGGTACAGAA GCTGATAAAC
GCGAAGCTAC ACTTCGTCAT ACCGATTCAC GACTTCTGGG CGAGGATCCC CGGCTTAACC
ACCGGCGTCG ACCCGAGGAA GGGCGAGTTC GACTTCGTCG CCAACTCCCG CTTCCTGTAC
CAAGGCGAGA ACTCCCGCGT GCAGCAGATG TGGTACTCCT TCGAGCTGTG GCCCTCGCTC
TACCTCTGGA TGAACCCCAT AGACGCCCAG CTGCTGGGCC TCAAGACCGG CGACGCGGTG
AGGGTGAGGT TCTTAATCCA GGCGTTGAAT GACCTTGAGG TCTCGAGCAT GGTGACGAAG
GTGTGGGTCA CTCCCAGGGT GAGGGAGGGC GTCGTGGTGC TTCTACACGG CGCATATAGG
TGGAGGCCGG CTTGGTGGAA CCACAGCAGA GTGTTGGAGG TCGCCGGCTC CTACCCAACC
TCCGCGGTCT TCCAGACCGT CGACATCAAG GTAGACGGCG CAGGCCTCGT GGATAAGATA
CGGGCGGGGG ACTTCAACTG GAAACGCCTC AAGTGGACTA AGGTCGCCGA CCCCGCGCCC
CTCACTGAGG AGGAGCTCGG CAAGATCGCG ATTACGAAGC TGTACAAGGA GAGGGGCATG
CCCTATTGGG ACCTCGCCAA GTACGTCTGG TGGAAGGAGA CCGGCACCAC CTACGACTTC
GTACTCCCGC AGACCAATGA CCCAATCGCC TGGACTAACC TCTGGCACTT CAAGGTCAAG
ATAGAGAAGG CGGATCCCAA GGAGTACGGC TCTATGGAGT TCGACTTCGA GGCCGCGAAG
GCCGCCTTCG ACTTCTTCTA CAAACTACTG ACACACGGCA GCAGAGGCAA GCTGGCCCAG
GGCATATACA GCCTGTGGTC CCAGAGGTGG GGCGGGCTGA GGCTGGAGTT CCCACGTATA
CTCGGCATAA TCAGGGGAGA GGTGCTGTGC CCCAAGCCCG GCGCGCCCGG TTGCGCGAGG
CCCGACTTGG TCAGGATGAG GCGCACCTTC CTGTGGGGCC TGGGCATAGG CCCCAAGCCC
GCCAAGTCTG CCTACTACTG GCCTCCGAAG GTGCCGGACC TCCGCGAGCT TCCGTGA
|
|---|
| Protein sequence | MTEAVLSRRD FLKASAAAMA VGIAAGAFVK AQLYSEVEQD QNWWSGATGK FKGYPTLYRV
PPTGGVKEVG GSFEVSTPDG LKTISLKWWE NWIDWREYDA KAWPKPRERR YFIATGGVCG
GCEVSCHFVV WIDKDTRLAR KVMVNPLNKS NWGLCVRGQS AAAAAAHPDR IVYILSKIDP
KTGKRVGARG DDNFVRVTYD ESLEIVSDYY AKAFYEYFVE GNPIGSTRLH WHEGRPLQTG
YFTHHPWVKD WEQQHAFGSH TNLCSAGARL GNNLWIAMDR NSPDYYRAKV VVNHGMGHLG
DAAHFLMSHG PRLAVARLKG TKIISVREKY FHTELLADYW VTPWPGTEAW LWAAVANVLI
NELNAVDWEF VRRWWNWDWF LRDRKLLQHL YNMGYIKTLP PDDIYGVTED GVVYIKDYAK
AWDYFQKFLR EYFANFTPEY AAWVTRLNAK TPPPDPLSEE EVRNAAALIR AIAKEVAAAG
KALSINQWRG PGQTYGGWML ARMFFLLIAL TGAVGTVGGT GAASWHNTDF VYYWWQGTLA
AQVLKRKLDG PAVWNINMIA PEESAFGSYD PTNTIPFRMY DPEWQEYWRS LGFAVPDRVY
VWISRVVNPP ATYQAGAQWV RFFANPEKVE LKVHMTQFWN ETCYFSDLCI SEGHWFERHD
PQPAAPGIYA PDRWFSVRWP SYVIFLMRMG WRPKDPHRSA LEAHQQIGLG DVISPEEWYL
ELAWRTIAKT VLMAKKNGKP VEDLLRDKEV DYLGAKVKIP SLADRLAFLI DVNRGKRYAA
QLGIPPEQLP EKLIRDLYDG KITYEQFVND IRKQVVPTMW DMYNWAVYAY SPTVVKFSKD
KGLEPVEALE LYQFVIHDTN VYAEKTYLKK VPREQVARVD PITKLAYDKA GGIAGVEIDG
EIYLGFNVLG TVTHTLKLEW YNPAMAEQEL REVSIPIIPL EADLKKAIAG DLGTVQKLIN
AKLHFVIPIH DFWARIPGLT TGVDPRKGEF DFVANSRFLY QGENSRVQQM WYSFELWPSL
YLWMNPIDAQ LLGLKTGDAV RVRFLIQALN DLEVSSMVTK VWVTPRVREG VVVLLHGAYR
WRPAWWNHSR VLEVAGSYPT SAVFQTVDIK VDGAGLVDKI RAGDFNWKRL KWTKVADPAP
LTEEELGKIA ITKLYKERGM PYWDLAKYVW WKETGTTYDF VLPQTNDPIA WTNLWHFKVK
IEKADPKEYG SMEFDFEAAK AAFDFFYKLL THGSRGKLAQ GIYSLWSQRW GGLRLEFPRI
LGIIRGEVLC PKPGAPGCAR PDLVRMRRTF LWGLGIGPKP AKSAYYWPPK VPDLRELP
|
|---|
| |