| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1048 |
|---|
| Symbol | |
|---|
| ID | 6165166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 933671 |
|---|
| End bp | 934591 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641668200 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001794425 |
|---|
| Protein GI | 171185506 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.82429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGTCG TCCTAGGCAG CCCGCTCTCC GCCGTCCCAA AGCCCTGGCA CCACTTCGAC
GTGCCGGGGG TCATGGTCAA CGCCCTCGAC ATACGCCGCG ACCCCCGCGC CGCCCTCGGC
TACGAGGGGG AGCTCTGGGT GGACTCGGGG GGCTACCAGA TACTCAAGAG GGGTCTCTCC
ATAGACGTGG ACAAAATCGC CGAGATATAC AGAAGGGTAG ACGCCCAGCT CTACCTCTCC
CTAGACGTGC CCCCCTCCCC CTCGGACCCC CCCGACGCCG CCGAGAAGAA GATGAGGAAG
TCCTACCAGA ACTGGCTCAA GCTCAGGAGA GCCGTGGGAG ACGCCGTAGT GCCTGTCCTC
CACGTCTACA GAGACGAGGC CCTCTTCGAG AGGTACCTCG CTCTGTACAG AGACGCCCCA
GCCCTAGCCA TAGGCGCCGC CGTCCCCTAC GTCTTAATCA CCAGGGGCGC CCCCAGGGGG
TCGCGGCAAC ACGCCCTCTC CCTGATAAAG AGGGCAAGGG AGGAGTTCAG AGGCGCGCTA
CACGTGCTGG GCATGGGGAG CCCCTCGGTG ACCCCCATAC TAGCCGCCCT GGGGGTAGAC
AGCACAGACA GCGCCACATG GCGCCTCAAG GCCGCCTACG GCAAGGTCCT CCTCCCGGGA
GGCGGCGAGC GCCACGTCAC AGACCGCCCC GTCAACTTCG GCAGAGCCAA GCCCAAAGAC
GGCGAGCTGG AGGAGCTGCG GAGGTTCCTG GCGCAGTACG GCTTCCCCTC CCTCGACGGC
TTCCACGAGA GAATCGCGAG GAGCTTCGAA TACAGAGCCC TCGTCAACGC CTTCGTGGTG
ATAAAGTCGG CCGCCTACCC CCCCAGGCCC CCCGCCTTCA GAAGGCTATA CGCCCTCTTC
GCGGGTCCCC GGCATATTTA A
|
|---|
| Protein sequence | MRVVLGSPLS AVPKPWHHFD VPGVMVNALD IRRDPRAALG YEGELWVDSG GYQILKRGLS
IDVDKIAEIY RRVDAQLYLS LDVPPSPSDP PDAAEKKMRK SYQNWLKLRR AVGDAVVPVL
HVYRDEALFE RYLALYRDAP ALAIGAAVPY VLITRGAPRG SRQHALSLIK RAREEFRGAL
HVLGMGSPSV TPILAALGVD STDSATWRLK AAYGKVLLPG GGERHVTDRP VNFGRAKPKD
GELEELRRFL AQYGFPSLDG FHERIARSFE YRALVNAFVV IKSAAYPPRP PAFRRLYALF
AGPRHI
|
|---|
| |