| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1042 |
|---|
| Symbol | |
|---|
| ID | 6164973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 928346 |
|---|
| End bp | 930646 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641668194 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001794419 |
|---|
| Protein GI | 171185500 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.119019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.445057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAT TGCTGATAGC GGTGCTACTG GCGGCTCTGG CGGTGTATGC ACAACAGATC
TATGCCCTAC ACTATACGCC TGCCGAATGC GACATCAACC CATATAGATG TATAGTTGGG
ACGACGGCTT ACTCGGAAAG CGCATCGGAA TGGGCAAAAG CGTTTATTGA AGCAAAAGGT
TGGTATGGCG AAATAATGCC AGGCTATATC GTGATTACTG CTCTGCCCAA TGGGAGCGTC
TCCGAGTACA GCTTTACAAA AGCTGTCGCT CTGTTCGACA TAGTGCAGGA TCCATGGAGT
AAGGTGGAGC CGCTGTATGT TCGAGATGTG ATGTACATCG ACTACGTGCT GGGGATCCCG
ATCAAGAGCG ACTCCAGGCC GGTAATAGAC CTGAGCACCT TGAAGCACTT TACCGGGTCT
GTTTACAACG TGACTGGGCC TGGCAACACC GCCACGGTGC ACAACGTGAT TATCCGCTAC
AGGATATATT CGGATGGGAG GAGGGAGTTC TGCCTTGAGG ATCACAGAAC TTCTCAGTCC
GAGTGGTATA GGTGGGCTGT GAGCTTGGGC TACGATCTTG CCCCTATCTG GGACGACCTT
GTCTTCTACA GCTGCCGGCC TCCCGACAGA GCGCCTAGAA ACATAACCCT CGTAGTGGGG
CAGGACGGCC TTACGGTCTA CGTAGACGGC AACCGCACGT GGTGGCTCTC CAACATCAAA
GGCTACATCT ACATCGGGCC GTACAGGATA GAGCGCATCG AGATGTATGT GTTATACGCC
ATACTGTATT CAAATGTATT CCTTAAGGTG AAGGAGCCTT TAGGCAGAAT CCAGCTCTAC
CTCGGCAACG AGACCCTTGT AGCTCCGCCA AAAGCCGTCA TACCTTATAC AGGCATAGCT
CTCTACAACC TTGTTAGTTC CCATTACATT GCTCACGTGG CGTTTAGTTG GGAAAACGGT
AGCGCGGTTC TTCCGGGTAG AGATGTGGGT GGGCGCGTCT ACGTCCGGCC GGACGTCAGC
GCGTCGGTCT ACGGCAGGCT GGCGTCTCTC CCATACATGG CGGTGATCGA CCTAGGCTGG
CTGAGGGGGA GGTACTGCCC CTACGGCGAC GTTGTTCTGT CCGGAGCGTA TAGGCGGATC
GGCGGCTCCG TCCAGGTGCT GGGGCCGGTC TCCATAGCCT GCACCAGATA CCCGGTGCGC
TTCATACTGC CAAACGGCTC CGCCCTCCTC GCCGTCGCGG AGGCCAACTC CACAGCCCAC
CTCCCCCCAC TCACGGTAGA CCTCGGCAAC GGCACGCGGG CGGTCACCGC CGAGGTAAAA
GTAGATGTGA GAGAGCCCGT GGACGTCGTA GTGCCCGTAT CACAGCGCCT CTACCGCGTC
GTGGTTAAGA CGCCCGCCGG CGTAAACGCC ACCTGGGCGC CCCCCGGCGT GCTTAGGCTA
CCCACCATCG AGCTGTCCAA CGGCACCCGG TACGTCCCCA CGGCGCCTGC GGAGGTCGTA
GTCGCGAGGC CGACTACCGT CGAGCCAAGG TACAGGAGGC AGTATCTAGT GCGCCTGGCG
GCGCCGGCTA ACTCCACCGC GGCGTGGGTT GACGAGGGGG CCCTCTTCAA CGTGACGCTG
GCGGATCCGT GGGTGGTGGG CAACGGCACC ATGTTCTCCG GCCTCCGCGT AAACGGGACT
GGGGAGAGGA GCTGGCGCGT CGTAAAGCCG GCGACGCTTG AGGCAAGCTA CGCCGAAGTC
CACTACTGGG TCTCCGTCGA AACGCCCGTC AACAAAACCG CGGGCTGGAC GCCGAGGGGC
GCCGTGCTGA CTTTCTCCGA CGTCCTCGAC CTCGGCAACG GCACGCGCCT AGTAGGCCCA
TCCCCCGCGT CTGTCGTGGT GGACGGGCCG AAGAACGTGT CTGTGGCGTA CGGGAGGAGG
CAGTACTACG TCCGCGTGGA GGGCGTCGAG GAGTGGAGCG GGTGGGCCGA CGCGGGCTCC
GTTGTGAAGC TGAACTCGAC CGCGGTGGGT GGGGTGGTCT ACAGACCGCT GGAGGACGTC
GCCGTGTTGC ACCCCGGCGT CTACAGGCCG AGGTTCCTCG CCTCCTACAC GTACGAGTTT
AGAGATGTGC TGGGCGTCCC CAACCCGGCG GCCTCTGTGG AGCTCTGCGG CGTGAGAGCC
GGCGCCGACC TGGCGGGGAG GGCACACGTG GAGGCCGAGA CAGACCGCCT CTGCACTCCG
GCGCTCTCCG CCTGGCCCGT CAGCCCATAC ACGCTGGTGG GTTTGGCTGC TGTGGTGTTG
TTGCTTCGGC GGCTACTCTA G
|
|---|
| Protein sequence | MRALLIAVLL AALAVYAQQI YALHYTPAEC DINPYRCIVG TTAYSESASE WAKAFIEAKG
WYGEIMPGYI VITALPNGSV SEYSFTKAVA LFDIVQDPWS KVEPLYVRDV MYIDYVLGIP
IKSDSRPVID LSTLKHFTGS VYNVTGPGNT ATVHNVIIRY RIYSDGRREF CLEDHRTSQS
EWYRWAVSLG YDLAPIWDDL VFYSCRPPDR APRNITLVVG QDGLTVYVDG NRTWWLSNIK
GYIYIGPYRI ERIEMYVLYA ILYSNVFLKV KEPLGRIQLY LGNETLVAPP KAVIPYTGIA
LYNLVSSHYI AHVAFSWENG SAVLPGRDVG GRVYVRPDVS ASVYGRLASL PYMAVIDLGW
LRGRYCPYGD VVLSGAYRRI GGSVQVLGPV SIACTRYPVR FILPNGSALL AVAEANSTAH
LPPLTVDLGN GTRAVTAEVK VDVREPVDVV VPVSQRLYRV VVKTPAGVNA TWAPPGVLRL
PTIELSNGTR YVPTAPAEVV VARPTTVEPR YRRQYLVRLA APANSTAAWV DEGALFNVTL
ADPWVVGNGT MFSGLRVNGT GERSWRVVKP ATLEASYAEV HYWVSVETPV NKTAGWTPRG
AVLTFSDVLD LGNGTRLVGP SPASVVVDGP KNVSVAYGRR QYYVRVEGVE EWSGWADAGS
VVKLNSTAVG GVVYRPLEDV AVLHPGVYRP RFLASYTYEF RDVLGVPNPA ASVELCGVRA
GADLAGRAHV EAETDRLCTP ALSAWPVSPY TLVGLAAVVL LLRRLL
|
|---|
| |