Gene Tneu_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1038 
Symbol 
ID6164866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp926358 
End bp926993 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content60% 
IMG OID641668190 
Productsuperoxide dismutase 
Protein accessionYP_001794415 
Protein GI171185496 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.170029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.225243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGG TTAAGAAATA CACGCTTCCC AACCTGCCCT ATGCCTACAA CGCCCTGGAG 
CCCTACATCG CCGAGGAGAT AATGAGGCTC CACCACCAGA AGCACCACCA GGGCTACGTC
AACGGCGCAA ACGCCGCCCT CGAGAAGCTG GAGAAGTTTA GGAAGGGCGA GGCCCAGATA
GACATAAGGG CCGTCCTCAG AGACCTCTCC TTCCACCTCA ACGGCCACAT ACTGCACTCC
ATCTTCTGGC CCAACATGGC GCCCCCGGGC AAGGGCGGCG GCAAGCCGGG CGGCAAGACC
GCCGACCTCA TAAACAAGTT CTTCGGGAGC TTCGAGAAGT TCAAGGAGGA GTTCAGCCTC
GCCGCCAAAA ACGTGGAGGG CGTCGGCTGG GCCATTCTGG TATACGAGCC AGACCAGGAG
CAGCTCCTGG TGCTACAGGT GGAGAAGCAC AACCTCATGC ACGCCGCAGA CGCCCAGGTC
CTCCTGGCTC TAGACGTCTG GGAGCACGCC TACTACCTCC AGTACAAGAA CGACCGCGGT
AGCTACGTGG ACAACTGGTG GAACGTGGTG AACTGGGACG ACGTGGAGAG GCGCCTCCAG
AAGGCCTTAA ACGGGCAGAT CGCCCTAAAG ATTTAA
 
Protein sequence
MASVKKYTLP NLPYAYNALE PYIAEEIMRL HHQKHHQGYV NGANAALEKL EKFRKGEAQI 
DIRAVLRDLS FHLNGHILHS IFWPNMAPPG KGGGKPGGKT ADLINKFFGS FEKFKEEFSL
AAKNVEGVGW AILVYEPDQE QLLVLQVEKH NLMHAADAQV LLALDVWEHA YYLQYKNDRG
SYVDNWWNVV NWDDVERRLQ KALNGQIALK I