Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1038 |
Symbol | |
ID | 6164866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 926358 |
End bp | 926993 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641668190 |
Product | superoxide dismutase |
Protein accession | YP_001794415 |
Protein GI | 171185496 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.170029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.225243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTCGG TTAAGAAATA CACGCTTCCC AACCTGCCCT ATGCCTACAA CGCCCTGGAG CCCTACATCG CCGAGGAGAT AATGAGGCTC CACCACCAGA AGCACCACCA GGGCTACGTC AACGGCGCAA ACGCCGCCCT CGAGAAGCTG GAGAAGTTTA GGAAGGGCGA GGCCCAGATA GACATAAGGG CCGTCCTCAG AGACCTCTCC TTCCACCTCA ACGGCCACAT ACTGCACTCC ATCTTCTGGC CCAACATGGC GCCCCCGGGC AAGGGCGGCG GCAAGCCGGG CGGCAAGACC GCCGACCTCA TAAACAAGTT CTTCGGGAGC TTCGAGAAGT TCAAGGAGGA GTTCAGCCTC GCCGCCAAAA ACGTGGAGGG CGTCGGCTGG GCCATTCTGG TATACGAGCC AGACCAGGAG CAGCTCCTGG TGCTACAGGT GGAGAAGCAC AACCTCATGC ACGCCGCAGA CGCCCAGGTC CTCCTGGCTC TAGACGTCTG GGAGCACGCC TACTACCTCC AGTACAAGAA CGACCGCGGT AGCTACGTGG ACAACTGGTG GAACGTGGTG AACTGGGACG ACGTGGAGAG GCGCCTCCAG AAGGCCTTAA ACGGGCAGAT CGCCCTAAAG ATTTAA
|
Protein sequence | MASVKKYTLP NLPYAYNALE PYIAEEIMRL HHQKHHQGYV NGANAALEKL EKFRKGEAQI DIRAVLRDLS FHLNGHILHS IFWPNMAPPG KGGGKPGGKT ADLINKFFGS FEKFKEEFSL AAKNVEGVGW AILVYEPDQE QLLVLQVEKH NLMHAADAQV LLALDVWEHA YYLQYKNDRG SYVDNWWNVV NWDDVERRLQ KALNGQIALK I
|
| |