Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1034 |
Symbol | |
ID | 6164980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 924444 |
End bp | 925214 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641668186 |
Product | ABC-2 type transporter |
Protein accession | YP_001794411 |
Protein GI | 171185492 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.150436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCCC CCCTCTACGC CCTCTACAAG AGGGAGGTCC TCCGCCTCCT CAGGAGCAGA TACATGTGGC TCATGGTGGC GGCCCAGCCC ATCCTCTGGG TGGTCTTCTT CGGCAACAGC CTGGCGGGCC TCCCCCGGGG CTTCCTCGCC CAGTACTTCG GCGTTGAGAA CTACCTGGCC TACATGATAC CCGGCATGGC CTCCATAGTC ATGCTCACCA CCGGCATGTT CGCCTCCATG AGCCTAGTCT TCGACAAGAG GGTGGGGTAC CTAAGGAGGG TCCTGGTGAC CCCCACCCCC AAAACCGCCG TCTTCCTCGC CAAGGCCCTA GGCGCCGCCA CCCGCGGCCT CCTCACGATA CCCGTCATAC TGGCGGTCGG CGCCGCCTTC GGCGTGAGGT ACAACATAAA CCCAGCCGCC CTAGCCCTCT GGGCCGCCGC ACTAGCCGCC GCAGGCATGG GCTTCGCCGC CCTCTTCACA GCCCTCTCGG TAAACACCAC AGACGTCCAC GCCCCCGGCG TAATAAGCAA CTTCATCACC ATGCCCCTCA TGTTCACCTC CAGCGCCCTA TTCCCACGCC AGTTCTTCCC AGACTGGCTA AAGGCCATAA GCGAGGTGAA TCCCCTTACA TACCTCACAG AGCTCGGCCG CGAGGCCCTC GTATACGGCG CCCCCCCAAG CCCCACAGCC GCCCTAGCCA CAGCCGCCTT CGCCGCCGCC ACCCTAACCG CCGGCGTCAT AGCAGTAGAG AAGTGGCTCA ACGCAGATTA A
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Protein sequence | MISPLYALYK REVLRLLRSR YMWLMVAAQP ILWVVFFGNS LAGLPRGFLA QYFGVENYLA YMIPGMASIV MLTTGMFASM SLVFDKRVGY LRRVLVTPTP KTAVFLAKAL GAATRGLLTI PVILAVGAAF GVRYNINPAA LALWAAALAA AGMGFAALFT ALSVNTTDVH APGVISNFIT MPLMFTSSAL FPRQFFPDWL KAISEVNPLT YLTELGREAL VYGAPPSPTA ALATAAFAAA TLTAGVIAVE KWLNAD
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