| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1028 |
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| Symbol | |
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| ID | 6164998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 919563 |
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| End bp | 920924 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641668180 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001794405 |
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| Protein GI | 171185486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.992034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0454913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTGA GGGCTCCGCA GGAGGAGTGG ATGGTCCCCC GCCGGTGGTA CAACATCGTC
CCCGATCTGC CCAAGCCCCT GCCGCCGTAT CTTAAGCCTA ACGGCGAGCC GGTGAGGCCG
GAGGAGTTCG AGGTGTTGTT TGCGAGGGAG CTGGTTAGGC AGGAGTTCTC CCAGGAGAGG
TGGATCCCGG TGCCGCCCCC CGTGAGAGAC GTGTACCTCC TCTGGCGGCC GACGCCGCTT
CTGAGGGCGA GGAGGCTGGA GGAGCTCCTC AAGACGCCGG CGAGGATCTA CTACAAGTTC
GAGGGGGTTT CGCCGCCGGG GAGCCACAAG CCGAACACGG CGGTGGCCCA GCTGTACTAC
GTATCGAAGG AGGGGGCGGG GAGGGTCACC ACCGAGACTG GGGCGGGGCA GTGGGGCTCC
TCGGTGGCCT TCGCCGCCTC TCTATTCGGC GTGAAGGCCA CCGTCTACAT GGTCAGGGCG
TCCTACGGCC AGAAGCCCTA CAGGAGGGTC CTCATGGAGC TGTGGGGGGC GGAGGTGGTG
CCCAGCCCCA GCGACAGGAC CGAGGCCGGG AGGAGGTTCC TGGCCGAGGA CCCCAACCAC
CCGGGGTCGC TGGGGATAGC CATCTCGGAG GCTGTGGAAG ACGCCGTGAA GACGGGGGCG
AAGTACGTCC TCGGCTCGGT CCTCAACCAC GTACTTATCC ACCAGACGGT TATAGGCCTC
GAGGCGGCTG AGCAGATCAG GTACTTCGGC GACTACCCAG ACTACGTGGT GGGGGCCTGC
GGAGGCGGCA GCTCCTTCTC GGGCCTCTTC TGGCCTTTCT ACCACGAGAA GAGGGTGGGG
AAGGCCGAGA GGGATGTGAA GTTCGTGGCG GTGGAGCCCG TGGCGGTCCC CACCTTGACC
AGGGGGGAGT ACATATACGA CCTGGGGGAC ACGGCCGGCT TGACGCCCTT GATCAAGATG
TACTCCGTGG GCCACGGCTA CAAGCCGCCT CCCATACACG CGGGTGGTCT GAGGTACCAC
GGCTGCGCGC CCACCCTCTC CCTGCTCGTG GCGGAGGGGG AGGTCTCCGC GGTGGCCTAC
AGGCAGAGGG AGGTTTTCGA GGCGGCGAGG CTGTTCGCCC AGGCGGAGGG GGTGGTGCCT
GCGCCCGAGT CGGCCCACGC CGTGAAAGCC GCCGTGGAGC TGGCTCTGCA GGCCAAGAGG
GAGGGGAGGC CCGTCACGAT CCTCTTCAAC ATGTCGGGCC ACGGCCTCCT GGATCTGGCG
GCTTACGACG AGTACATGAG GGGGGTTCTG CAGGACGTGG AGCCGACTGC GGAGGAGATT
ATGGCGAACA TCGCCAGAGC TAAGGCCCTT CTCCGTCAGT AG
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| Protein sequence | MGVRAPQEEW MVPRRWYNIV PDLPKPLPPY LKPNGEPVRP EEFEVLFARE LVRQEFSQER
WIPVPPPVRD VYLLWRPTPL LRARRLEELL KTPARIYYKF EGVSPPGSHK PNTAVAQLYY
VSKEGAGRVT TETGAGQWGS SVAFAASLFG VKATVYMVRA SYGQKPYRRV LMELWGAEVV
PSPSDRTEAG RRFLAEDPNH PGSLGIAISE AVEDAVKTGA KYVLGSVLNH VLIHQTVIGL
EAAEQIRYFG DYPDYVVGAC GGGSSFSGLF WPFYHEKRVG KAERDVKFVA VEPVAVPTLT
RGEYIYDLGD TAGLTPLIKM YSVGHGYKPP PIHAGGLRYH GCAPTLSLLV AEGEVSAVAY
RQREVFEAAR LFAQAEGVVP APESAHAVKA AVELALQAKR EGRPVTILFN MSGHGLLDLA
AYDEYMRGVL QDVEPTAEEI MANIARAKAL LRQ
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