| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1023 |
|---|
| Symbol | |
|---|
| ID | 6164880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 914787 |
|---|
| End bp | 915287 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641668175 |
|---|
| Product | PaREP1 family protein |
|---|
| Protein accession | YP_001794400 |
|---|
| Protein GI | 171185481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0120511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTTG TAGAAATCAA GATCCCGAAG CCGGTCTACG AACTGCTGTC TAGACGCGGC
GTTGACGTAG AGGCCGAGGT TTTAGACAAG TTGCTGTCTG AACTGGATCC GCCTGAGGAG
GCGGCTGAGA GGGTTAGGCT GGCAGAGAGG CTCTACGCCG AGGCCGTGCA GTACGTCGAG
AGGGGCGACC CCGTGCAGGC AAGCGAGAAG CTGTATAAAG CCGCTGAGGA GTGCGTAAAG
GCTCTGGCTA CGTGGTTCAA GACTCCGGAG GCGGCTGAGG CGAGGAGAGA GGGGAGGTGG
CGGACTAAGC TCCTGGCCAG AGCGGCGAAG ACCCTCAGCG CCGTGTTGAA CCAGCCCCAG
ATCAACATCG GCTGGAGCGT GGCGTACGAC CTACACGTCC ACGAGGCCGC GTTGGCTGTA
GAACACGTCA AAGCCGCCGC GCCGCAGATA GAGAAGCTCC TGGAGACGGC TAGGGCCCTG
CTACGGAGCT CTCACACGTA G
|
|---|
| Protein sequence | MEFVEIKIPK PVYELLSRRG VDVEAEVLDK LLSELDPPEE AAERVRLAER LYAEAVQYVE
RGDPVQASEK LYKAAEECVK ALATWFKTPE AAEARREGRW RTKLLARAAK TLSAVLNQPQ
INIGWSVAYD LHVHEAALAV EHVKAAAPQI EKLLETARAL LRSSHT
|
|---|
| |