Gene Tneu_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1000 
Symbol 
ID6164810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp891704 
End bp892609 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content59% 
IMG OID641668153 
Producthypothetical protein 
Protein accessionYP_001794378 
Protein GI171185459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0535997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00417004 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACGT TGTTTGACAG ACGCATCGGC GGACGGACGT TGAGGGAGCT TGCCTGGGAG 
CTCTACAGAG GTGGGGCCTA CAGGCCGCCC CGCTCCGAGC TGGAGCTCGC CCAACTGGTC
CAAATCCAGA GGAGGATCTC GGGGGGCGTG CCGGTGCCCA AAATGCCGTA TGTCCCCGGC
AATAGGAAGG TGGGGAGGAT ATGGACATTC GACCTCCCGC CGGTTCTGAC TTGCCCCTAC
GCCACCTTCT GCGGGAGGCC GGGGTCCGCC GGGCTCTACC GCGGGAGGGG GCTGGTTTGC
TACGACATAA ACATCGCCAG GTACAACCCA CTGCACCTCC TGAGGGAGTA CATCAACTTC
ATCCACGTCG TGAGGGAGGG CTACAGCTGG CTTAGAGACT GGACCCGCTT CGTCGTGGAC
TATAGGGGTG CGAGAATTAT TAGGTTCCAC GTGGGCGGAG ACGTATTCTC AGACTGGTAC
TGGGGCTACC TCAAGAAGCT GGCGTCCGAC TTCCTCCACG TGACGTTCTA CCTCTACACG
CGGTCGTTCC CCATTGTGGC GGCGTCGCCA GAGCGGCCGC CCAACCTGGT AGTCCTCATG
TCTCTAGACG GGGCCAACTA CAAGGCCTAT GAGAAATACG GCGCCTACTT CGACCACATC
ACCTATCTAG CCGCTGGCGA AGACGCAAGG GGCCAGATCC CCGCGATAGA AGCCCTGGCT
AAGTGGGCCG CCCAAAACGG CAAGAGGCTC ATCATATTCC TAGAACACAG AAGACTCCCA
CAGCTGAGAC AAGCCCTGGA GAAATACAGC CAGTACATCT GCCCAAACGA GCTAGGCGTA
AATACGACAT GCGAAAAGTG CAGACGCTGC TTCGCGCCCC CAAGGGACAG ACATTTTACT
GCTTAA
 
Protein sequence
MLTLFDRRIG GRTLRELAWE LYRGGAYRPP RSELELAQLV QIQRRISGGV PVPKMPYVPG 
NRKVGRIWTF DLPPVLTCPY ATFCGRPGSA GLYRGRGLVC YDINIARYNP LHLLREYINF
IHVVREGYSW LRDWTRFVVD YRGARIIRFH VGGDVFSDWY WGYLKKLASD FLHVTFYLYT
RSFPIVAASP ERPPNLVVLM SLDGANYKAY EKYGAYFDHI TYLAAGEDAR GQIPAIEALA
KWAAQNGKRL IIFLEHRRLP QLRQALEKYS QYICPNELGV NTTCEKCRRC FAPPRDRHFT
A