Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0970 |
Symbol | |
ID | 6164632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 859978 |
End bp | 861321 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641668125 |
Product | hypothetical protein |
Protein accession | YP_001794351 |
Protein GI | 171185432 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.524201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0268833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAGGG CCAGGATCAG GGGGATATAC GCCACGGCGC TGACGAAGCT GGCGCTGGAC TGGGGCTTCA AGGTCGTGCA GCCCACCCCG CAGATAGCGG AGAGGTTCGG CCTGCGGCCC GACCCCTCCC CGCCGGACGT CACAGTGAAG GACCACGAGT CTAAAACCGG CGTGGTGGCC ATCGGCGACT GCCCCGCCGT GGACCACCTC CTGGAGAGGC TTAGGGAGTA CGCCGACCCC GTCGTGGCGA AGGCCTCGGC GGGTCTCCAC GACGTGTTTG TGGGGCGGGT CGTGGGGGAG GGGCTGGTGG AGGGGCCCGG GGGCCTCATG GAGGTGCCCG GCAGGTACGT CCTGCAGCCG GGGGCCGCCT CGGTGTTCAC GGTGGTTAAG CCCCCCGTCG GCCCCCTGAG GGGGGTGGCG GTGCCGGAGA TCGTGGTGGA TGGGAAGCTC CTGGAGCTCA ACACCACGGG GAGGGTGGCC TACAGCAGAC ACATAGGCGA GGAGGAGAGG CTTAGGCTGA GGATACTGGC CGAGACGAGG CTGAAGGCCT ACGCCTCCAT AGGCCTACGC TTCAAGTCCT CGGCTAAATA CGCGGGGGAG GAGGAGCTGG CCAGGGAGGC CGAGGAGCTC TACAGGGAGC TCCTGAGGCT GTCGCAGGGC GGGCCCCCAG GTGCTCTCCT GAGGAGGGGG AGGTGCCTCG CCGTGGTGCT CTTTGACAAA CGCGCCAAGT TTAAGCTCGA CGAGGCCCGG GCGGCCGTCG TGCCGACCGT GAGAGGCCAC CACGCCTTGA GGGGGCAGGG CCTGGGGAGG TGCCTAGACC TCCTCGACCA CGTGGGGGCC GACGTCTACG AGAGGGCGGC GGCCTTCCTC GCCAGGGGGA GGGTCGCCAT ATACCACGTC AAGCCCTGGG GCGAGGTGGT GAAGATGCGG GGGGAGGTGG TCAAGGCCCT GGAGGACGTC CTCGTGGTGA AGAGGACGCT GAAGCCCGGC GGCGTCCTCG ACGGGATCGG CGCCAGGATC GAGCCGGGGA CCTACGCCCT CACCTGCGTG CCCAGGTCCG GGGGGTACGT GGTGCACAGC TACTACAGCG CCTCCGGCGT CTACCTAGGC ACCTACGTGA ACGCCAACAC CGAGCCCGAG TGGGGCCGCC GCGTTGTATA CATCGACCTC CTGGTGGACA AGGCCTACGG CCCCGACGGC GTGGAGAGGG TGCTGGACGA GGAGGAGCTC CAGCGCTACG CCCACATGCT CCCGGAGAGG CTGCGGAGGC CGGAGGCCCC CGGCGGAAAA ATATGCACCC CCGAGGGGCT CACCTCAGCT CCTCCTCGGT CCTCCTCCGC TTGA
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Protein sequence | MFRARIRGIY ATALTKLALD WGFKVVQPTP QIAERFGLRP DPSPPDVTVK DHESKTGVVA IGDCPAVDHL LERLREYADP VVAKASAGLH DVFVGRVVGE GLVEGPGGLM EVPGRYVLQP GAASVFTVVK PPVGPLRGVA VPEIVVDGKL LELNTTGRVA YSRHIGEEER LRLRILAETR LKAYASIGLR FKSSAKYAGE EELAREAEEL YRELLRLSQG GPPGALLRRG RCLAVVLFDK RAKFKLDEAR AAVVPTVRGH HALRGQGLGR CLDLLDHVGA DVYERAAAFL ARGRVAIYHV KPWGEVVKMR GEVVKALEDV LVVKRTLKPG GVLDGIGARI EPGTYALTCV PRSGGYVVHS YYSASGVYLG TYVNANTEPE WGRRVVYIDL LVDKAYGPDG VERVLDEEEL QRYAHMLPER LRRPEAPGGK ICTPEGLTSA PPRSSSA
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