Gene Tneu_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0970 
Symbol 
ID6164632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp859978 
End bp861321 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content69% 
IMG OID641668125 
Producthypothetical protein 
Protein accessionYP_001794351 
Protein GI171185432 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.524201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0268833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAGGG CCAGGATCAG GGGGATATAC GCCACGGCGC TGACGAAGCT GGCGCTGGAC 
TGGGGCTTCA AGGTCGTGCA GCCCACCCCG CAGATAGCGG AGAGGTTCGG CCTGCGGCCC
GACCCCTCCC CGCCGGACGT CACAGTGAAG GACCACGAGT CTAAAACCGG CGTGGTGGCC
ATCGGCGACT GCCCCGCCGT GGACCACCTC CTGGAGAGGC TTAGGGAGTA CGCCGACCCC
GTCGTGGCGA AGGCCTCGGC GGGTCTCCAC GACGTGTTTG TGGGGCGGGT CGTGGGGGAG
GGGCTGGTGG AGGGGCCCGG GGGCCTCATG GAGGTGCCCG GCAGGTACGT CCTGCAGCCG
GGGGCCGCCT CGGTGTTCAC GGTGGTTAAG CCCCCCGTCG GCCCCCTGAG GGGGGTGGCG
GTGCCGGAGA TCGTGGTGGA TGGGAAGCTC CTGGAGCTCA ACACCACGGG GAGGGTGGCC
TACAGCAGAC ACATAGGCGA GGAGGAGAGG CTTAGGCTGA GGATACTGGC CGAGACGAGG
CTGAAGGCCT ACGCCTCCAT AGGCCTACGC TTCAAGTCCT CGGCTAAATA CGCGGGGGAG
GAGGAGCTGG CCAGGGAGGC CGAGGAGCTC TACAGGGAGC TCCTGAGGCT GTCGCAGGGC
GGGCCCCCAG GTGCTCTCCT GAGGAGGGGG AGGTGCCTCG CCGTGGTGCT CTTTGACAAA
CGCGCCAAGT TTAAGCTCGA CGAGGCCCGG GCGGCCGTCG TGCCGACCGT GAGAGGCCAC
CACGCCTTGA GGGGGCAGGG CCTGGGGAGG TGCCTAGACC TCCTCGACCA CGTGGGGGCC
GACGTCTACG AGAGGGCGGC GGCCTTCCTC GCCAGGGGGA GGGTCGCCAT ATACCACGTC
AAGCCCTGGG GCGAGGTGGT GAAGATGCGG GGGGAGGTGG TCAAGGCCCT GGAGGACGTC
CTCGTGGTGA AGAGGACGCT GAAGCCCGGC GGCGTCCTCG ACGGGATCGG CGCCAGGATC
GAGCCGGGGA CCTACGCCCT CACCTGCGTG CCCAGGTCCG GGGGGTACGT GGTGCACAGC
TACTACAGCG CCTCCGGCGT CTACCTAGGC ACCTACGTGA ACGCCAACAC CGAGCCCGAG
TGGGGCCGCC GCGTTGTATA CATCGACCTC CTGGTGGACA AGGCCTACGG CCCCGACGGC
GTGGAGAGGG TGCTGGACGA GGAGGAGCTC CAGCGCTACG CCCACATGCT CCCGGAGAGG
CTGCGGAGGC CGGAGGCCCC CGGCGGAAAA ATATGCACCC CCGAGGGGCT CACCTCAGCT
CCTCCTCGGT CCTCCTCCGC TTGA
 
Protein sequence
MFRARIRGIY ATALTKLALD WGFKVVQPTP QIAERFGLRP DPSPPDVTVK DHESKTGVVA 
IGDCPAVDHL LERLREYADP VVAKASAGLH DVFVGRVVGE GLVEGPGGLM EVPGRYVLQP
GAASVFTVVK PPVGPLRGVA VPEIVVDGKL LELNTTGRVA YSRHIGEEER LRLRILAETR
LKAYASIGLR FKSSAKYAGE EELAREAEEL YRELLRLSQG GPPGALLRRG RCLAVVLFDK
RAKFKLDEAR AAVVPTVRGH HALRGQGLGR CLDLLDHVGA DVYERAAAFL ARGRVAIYHV
KPWGEVVKMR GEVVKALEDV LVVKRTLKPG GVLDGIGARI EPGTYALTCV PRSGGYVVHS
YYSASGVYLG TYVNANTEPE WGRRVVYIDL LVDKAYGPDG VERVLDEEEL QRYAHMLPER
LRRPEAPGGK ICTPEGLTSA PPRSSSA