| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0968 |
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| Symbol | hemC |
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| ID | 6164556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 857867 |
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| End bp | 858757 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641668123 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001794349 |
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| Protein GI | 171185430 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.918465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00994772 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGATCC GCGTCGCCAC CAGGGGCTCC AAGCTCAGCC TAATCCAGAC CGAGGAGCTC
CTCGCCCAGA TAAAGGCCGT GGAGCCCGAC ATCCGCTTCG AAATCGTGGT GGTGAAGACC
ACCGGCGACT TGATACAGGA CAAGCCCCTC TTCCAGATAG GGGTCAAGGG CGTCTTCGAG
AAGGAGGTCA ACCTCGCCGT CTTGAGAGGC GAGGCGGACA TGGCCGTCCA CAGCCTAAAG
GACCTACCCT CCGACCTCAC CCCAGGCCTC GCCCTGGCGG GCTACTCCAG AAGAGCCCCG
CCCAACGACG CCCTGGTGAG CCCCCGCGGC TACACCCTCG AGACGCTCCC CAGAGGCGCA
GTCGTGGGCA CCTCCAGCGT GAGGAGAGCC GAGTTCCTAA AGGCGGCCAG GCCCGACCTG
GAGATCAAGC CCCTCCGGGG AAACGTAGAC ACGAGAGTCG CCAAGATCCT CTCCGGCCAG
TACGACGCCG CCGTCATGGC CGCCGCCGGC CTACAGAGGC TCTACGGCGG AGCCCCCCCA
ATCCCCGCGG TCCCCCTAGC CGTGGAGGAC CTCCCCCCGC CCCCCGGCCA GGGCATAGTG
GCGGCCGTAG CCAGAGAGGA GGACACCTGG CTAACCGACC TGCTGAGGAG AGCCAGCGAC
AGGAAAGCCG CGGCGGAGGC GGCGGCCGAG AGGGCCTTCC TCGCCGAGGT AGGCGCCGGC
TGCCACGTAG CCGTCGGAGG CATAGCAAGG CAGACCCCAG CCGGAATAGA GTTCACAGCC
GGATACGCCC AAGGCGGCCG GAAACACCTG GTAAAGGTCT ACGGAGAGGA CCCCACCGAG
GTCGGCAGGA GAGCGGCCAG ACTCGTCGCA CAAGCCATGA AAAAGACATA A
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| Protein sequence | MKIRVATRGS KLSLIQTEEL LAQIKAVEPD IRFEIVVVKT TGDLIQDKPL FQIGVKGVFE
KEVNLAVLRG EADMAVHSLK DLPSDLTPGL ALAGYSRRAP PNDALVSPRG YTLETLPRGA
VVGTSSVRRA EFLKAARPDL EIKPLRGNVD TRVAKILSGQ YDAAVMAAAG LQRLYGGAPP
IPAVPLAVED LPPPPGQGIV AAVAREEDTW LTDLLRRASD RKAAAEAAAE RAFLAEVGAG
CHVAVGGIAR QTPAGIEFTA GYAQGGRKHL VKVYGEDPTE VGRRAARLVA QAMKKT
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