Gene Tneu_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0966 
Symbol 
ID6164524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp855323 
End bp855931 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content62% 
IMG OID641668121 
ProductABC transporter related 
Protein accessionYP_001794347 
Protein GI171185428 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0043077 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAAGGG CCGTCCGGCT GGGGAAGAGA TACGGCGGCT CGTGGGTCTT TCGGGGAGTT 
GACCTGGAGC TCCCAGACGC CGGCATGGCC GCCGTCGTCG GTCCAAACGG CTCAGGCAAA
ACCACCCTCC TGAAGACCCT CGCCGGCCTC CTGAAGCCCG ACGAGGGCGA GGTGTACATA
GACGGGGCCC CCCTCGCCGA GGCACTACGG CGCATGAGAA GGGCGGTGCT CTACGCCCAC
CAGGAGCCCC TCGTCCTCGC GGGCACAGTA GAGGACAACC TCATCTGCCA CGACGGCGAC
GTCCTGGACG CGCTGGGCCT AACCCCCCAC CTCCACAGAA AAGCGAGACA CCTCTCCGGC
GGCTACAAGA AGCTCCTCAC CATCGCCAGA GTCCTCACAT GCCGCCCCAA AGCCGCCCTA
CTAGACGAGC CCACAGCCTA CCTAGACGCA GACAAGAGAA AAACCCTCAT GGACTACCTA
CGGCAGTACT CAAACAAAGC CCTCGTCCTC CTGACAACAC ACTACCCAGG AGACATCCCA
CCAGACACCC CCCACTACGA ACTCAGAGAC GGCGCCATAA AAACCACCAA ACCTACATAC
CCTATATAG
 
Protein sequence
MIRAVRLGKR YGGSWVFRGV DLELPDAGMA AVVGPNGSGK TTLLKTLAGL LKPDEGEVYI 
DGAPLAEALR RMRRAVLYAH QEPLVLAGTV EDNLICHDGD VLDALGLTPH LHRKARHLSG
GYKKLLTIAR VLTCRPKAAL LDEPTAYLDA DKRKTLMDYL RQYSNKALVL LTTHYPGDIP
PDTPHYELRD GAIKTTKPTY PI