Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0953 |
Symbol | |
ID | 6164596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 844089 |
End bp | 844514 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641668108 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_001794334 |
Protein GI | 171185415 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000151261 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000286609 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGGCCTC CCCCGTGGGC GTTCATATCT AGGAAGGGGC TGAGGGAGGT GGCGCTGTGG TTGCTGTCCG ACCGGCCTAT GAACGGGGCT GAGCTGATTA GGGCTGTGGA GGAGGTGACG TGGGGGTTCT GGAGGCCCTC GCCCGGCTCG GTCTACCCCC TGCTGAGGCA ACTGGAGGCG GAGGGGCTGG CGAGGCGGAG GGAGGACGGG CGGTACGAGC TGACTGAGGC GGGGCGGCGG GCCGCCAAGC TGATCCCCTG GGCTAGGGGG CCGAGGCTGG GCGGGCCGAG GAGCGTGGAG GAGGTGGTGG AGGAGCTGGA GAGCTGGGCC CTCTATCTAG CCGACGTGGC CGCCACGGAG CCCGAGAGGG TTGCGCCCCA CAGGGAGCGG ATTAGGAAGA TCGCCGAGGT GCTTCAGAAG GTGTAA
|
Protein sequence | MGPPPWAFIS RKGLREVALW LLSDRPMNGA ELIRAVEEVT WGFWRPSPGS VYPLLRQLEA EGLARRREDG RYELTEAGRR AAKLIPWARG PRLGGPRSVE EVVEELESWA LYLADVAATE PERVAPHRER IRKIAEVLQK V
|
| |