| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0949 |
|---|
| Symbol | |
|---|
| ID | 6164284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 841112 |
|---|
| End bp | 841762 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641668104 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001794330 |
|---|
| Protein GI | 171185411 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0602] Organic radical activating enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00254529 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000124279 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTCA GGGTGCTGGA GATCTTCGCC TCCCTCCAGG GCGAGGGGGT GAACCTCGGC
AGACCCGCCG TCTTCATCAG GCTGGCGGGT TGCCCAATAC GGTGCCGCTA CTGCGACACG
AAGTACAGCT GGGACCCCCT AGGCGGCGAG GAGCTAGACG CGGAGGAGGT CGTAAGGAGG
GCGGCGGCGC ACGGCCCGCT GGGCCACGTG GTTATCACCG GCGGGGAGCC GCTGATCTGG
CGCAACCTCC ACGAGCTGGC CTGCCCCCTC CGGCGGCTGG GCACAGTGGA GGTGGAGACC
AGCGGCGTCT ATCCCCCCAC CCCCCAGCTG GACGCGTGCG TCGACTTCTA CGACGTGTCG
CCTAAGCTCT CCAACGCCGG GGTGGAGGCC CCCCTGCACC CCCACTACCC GAGGAGCCCC
AAGGCCTGGT TCAAGTTCGT GGTGGGGGGC GTGGAGGACG TGGAGGAGGC GGCCCGCTAC
GTTGAGAGAC ACGGCATACC CCGCGATAGG GTCTTCCTGA TGCCGCTTGC GGAGACGCCG
GAGCAACACG CCGAGGTCCT CCGCCGGATT TGGGACGCCG CGGTTGAACA CAGGCTCCGC
GTCACGCCGA GGCTACACGT GGAGGCTTGG GGCAACGCGA GGGGAAAGTA A
|
|---|
| Protein sequence | MKLRVLEIFA SLQGEGVNLG RPAVFIRLAG CPIRCRYCDT KYSWDPLGGE ELDAEEVVRR
AAAHGPLGHV VITGGEPLIW RNLHELACPL RRLGTVEVET SGVYPPTPQL DACVDFYDVS
PKLSNAGVEA PLHPHYPRSP KAWFKFVVGG VEDVEEAARY VERHGIPRDR VFLMPLAETP
EQHAEVLRRI WDAAVEHRLR VTPRLHVEAW GNARGK
|
|---|
| |