Gene Tneu_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0933 
Symbol 
ID6164549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp827113 
End bp827985 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content64% 
IMG OID641668090 
Producthypothetical protein 
Protein accessionYP_001794316 
Protein GI171185397 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.846552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0043077 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTGGTGA TATTGAACCT CACCGCGCCC CCGGTCCTCA TACTCCTGCT CCCAGCCGCC 
ATGTTTGGAA ACTACACGCT TCCCGCTCCT CCCGCCTCCG ACGTGGCGGC CTTTTCGCCA
AGCGGCGCCG TCCTGCCCAC CTGGGTAGTC GGCGGCAACC TGTACATACT CCAGGGCGGA
GACCCCGCCG TAGCTATATA CGTCCCCAGG TTTGAAAACT CCAGCGGTGT GTATAAAGTA
AGCCTAGGCG GAGGCGACGT CGTAATCCAA GCGCCCCCCG GGGTAATGAT ACAAGACATA
AACCCGCTAC CTAGGCAGAC GAAGCTGAAC AAGACAGGCC TATACCTCTA CCTCACAGGC
CCCGCCACAG TCACATACTA CTTCTTCAAG GTAGAGATAA AGCCGCCTCC GACCCAGCCC
CCCGCCACGA CGCAAACTGC GCCGAAGGCC ACGGCGCCTC CCACAGCCAC TCCGACGGCT
ACGCCGACAG CCACCCCGGC CACCACGTCC GCGCCTCAGC CGACCCCCAC GGCTACTCCC
ACGCCGCCTT CTGGAGCCGG GGCGCAGACT CAATGGCTAG TCGGCGCGGC CGTCGCGGCT
GTGGCGGCTG TGGCGGTTGC GGCGTATCTG TTGGCTAGGA GGAGGGGCGG CGGCGGGGGC
GACTGCGGCG ATCTACACGA GACGGATGTA GCCATCCTCA GGGAGCTTGA GAAGAGGGGC
GGTTCCGCGG ACAGGGGCGA GCTCCAGGAG GCCCTCGGCC TTCCGAAGAC CACCCTCCAC
AGGCACCTCC ACAAGCTCTC CAAATACGGC TTCGTGAGGC TGGTGCAGGT GGGAGGGTCC
CAGAGGGTCG AGCTGGTTAG GGGCTGTAGG TGA
 
Protein sequence
MLVILNLTAP PVLILLLPAA MFGNYTLPAP PASDVAAFSP SGAVLPTWVV GGNLYILQGG 
DPAVAIYVPR FENSSGVYKV SLGGGDVVIQ APPGVMIQDI NPLPRQTKLN KTGLYLYLTG
PATVTYYFFK VEIKPPPTQP PATTQTAPKA TAPPTATPTA TPTATPATTS APQPTPTATP
TPPSGAGAQT QWLVGAAVAA VAAVAVAAYL LARRRGGGGG DCGDLHETDV AILRELEKRG
GSADRGELQE ALGLPKTTLH RHLHKLSKYG FVRLVQVGGS QRVELVRGCR