Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0933 |
Symbol | |
ID | 6164549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 827113 |
End bp | 827985 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641668090 |
Product | hypothetical protein |
Protein accession | YP_001794316 |
Protein GI | 171185397 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.846552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0043077 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTGGTGA TATTGAACCT CACCGCGCCC CCGGTCCTCA TACTCCTGCT CCCAGCCGCC ATGTTTGGAA ACTACACGCT TCCCGCTCCT CCCGCCTCCG ACGTGGCGGC CTTTTCGCCA AGCGGCGCCG TCCTGCCCAC CTGGGTAGTC GGCGGCAACC TGTACATACT CCAGGGCGGA GACCCCGCCG TAGCTATATA CGTCCCCAGG TTTGAAAACT CCAGCGGTGT GTATAAAGTA AGCCTAGGCG GAGGCGACGT CGTAATCCAA GCGCCCCCCG GGGTAATGAT ACAAGACATA AACCCGCTAC CTAGGCAGAC GAAGCTGAAC AAGACAGGCC TATACCTCTA CCTCACAGGC CCCGCCACAG TCACATACTA CTTCTTCAAG GTAGAGATAA AGCCGCCTCC GACCCAGCCC CCCGCCACGA CGCAAACTGC GCCGAAGGCC ACGGCGCCTC CCACAGCCAC TCCGACGGCT ACGCCGACAG CCACCCCGGC CACCACGTCC GCGCCTCAGC CGACCCCCAC GGCTACTCCC ACGCCGCCTT CTGGAGCCGG GGCGCAGACT CAATGGCTAG TCGGCGCGGC CGTCGCGGCT GTGGCGGCTG TGGCGGTTGC GGCGTATCTG TTGGCTAGGA GGAGGGGCGG CGGCGGGGGC GACTGCGGCG ATCTACACGA GACGGATGTA GCCATCCTCA GGGAGCTTGA GAAGAGGGGC GGTTCCGCGG ACAGGGGCGA GCTCCAGGAG GCCCTCGGCC TTCCGAAGAC CACCCTCCAC AGGCACCTCC ACAAGCTCTC CAAATACGGC TTCGTGAGGC TGGTGCAGGT GGGAGGGTCC CAGAGGGTCG AGCTGGTTAG GGGCTGTAGG TGA
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Protein sequence | MLVILNLTAP PVLILLLPAA MFGNYTLPAP PASDVAAFSP SGAVLPTWVV GGNLYILQGG DPAVAIYVPR FENSSGVYKV SLGGGDVVIQ APPGVMIQDI NPLPRQTKLN KTGLYLYLTG PATVTYYFFK VEIKPPPTQP PATTQTAPKA TAPPTATPTA TPTATPATTS APQPTPTATP TPPSGAGAQT QWLVGAAVAA VAAVAVAAYL LARRRGGGGG DCGDLHETDV AILRELEKRG GSADRGELQE ALGLPKTTLH RHLHKLSKYG FVRLVQVGGS QRVELVRGCR
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