| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0930 |
|---|
| Symbol | |
|---|
| ID | 6164533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 824200 |
|---|
| End bp | 825138 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641668087 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_001794313 |
|---|
| Protein GI | 171185394 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0102641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGT GGATTAGGGA GAGGCCCGCG GAGTACGACC TCGCCAGCAG CGGCGTGGCG
AAGATAGAGG TCGAGCCGGC GGACGAGCCC CCCGTGGGGG AGATCCTCAC GTCGCTCTAC
AGGATATCCC CCCGGGAGCT CGCCCTCACG GCGGGCGCCC AGGAGGGTCT CTTCCTCGCC
TTCCACGCGG TGAGGCCGAA GGCCGTGGTC ACGGTGGCCC CCGAGTACGA GCCGATATGG
AGGCTACCCG GCGCCATGGG GGTGAGGCAC GTGGAGGTTA GAGACGTCTG GGAGGCCCCC
CTCGGGCCGG AGACAGCACT CGTCTTCTCA AACCCCAACA ACCCCACGGG GAGGTTCCTT
GGCCGGGGGG AGCTCCGGGA GCTCGCCGAC GAGGCCAGGA GGCGGGGCGC CGTCCTCATA
GTGGACATCA TATTCTCCGA CTTCGTCACA GACGACCTCG GAGGCCTCCC TCTGGAGAAC
GCCGTCTACG TCCACAGCAC GGACAAGTTC TACACAAGCG ACTACAGACT CGGCTGGGCC
TTCGGCGACT CCCGCATCGT GGAGAAGATA CGCGCCCTCA AGGACTTGGC AAACCCGGGC
CCCCGCGACC TGGAGAAGAG AGCCGCGGCG GCGCTCCTGT CCAGGAGGGA GGAGGTCAAG
AGGAGGAACC TCGCCGTGAT AGACAAAAAC GCGGCGGCGC TGCTCTCCGC GTTTCCAAAC
GCCATCTACA ACCCCCACAT GCCCATAGCC CTAGTGGAGG TGGGATGCGA CGACGTCGCC
TTCGCCGAGG GGCTCCTAAA ACGGGGGGTC AAGGTCATGC CCGGGACCTT CATGAAGGCA
CCCCGCGCGG TGAGAGTGGG GCTCGGCGTA GAGCCCCCAC CCCGCTTCAC CCAGGCGCTG
GGGATCCTAG GCGAAGCCGC TGGCAACTGC CGCACATAG
|
|---|
| Protein sequence | MFKWIRERPA EYDLASSGVA KIEVEPADEP PVGEILTSLY RISPRELALT AGAQEGLFLA
FHAVRPKAVV TVAPEYEPIW RLPGAMGVRH VEVRDVWEAP LGPETALVFS NPNNPTGRFL
GRGELRELAD EARRRGAVLI VDIIFSDFVT DDLGGLPLEN AVYVHSTDKF YTSDYRLGWA
FGDSRIVEKI RALKDLANPG PRDLEKRAAA ALLSRREEVK RRNLAVIDKN AAALLSAFPN
AIYNPHMPIA LVEVGCDDVA FAEGLLKRGV KVMPGTFMKA PRAVRVGLGV EPPPRFTQAL
GILGEAAGNC RT
|
|---|
| |