| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0902 |
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| Symbol | rpl10e |
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| ID | 6164568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 799580 |
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| End bp | 800128 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641668058 |
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| Product | 50S ribosomal protein L10e |
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| Protein accession | YP_001794285 |
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| Protein GI | 171185366 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.514047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.97666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGTTA GACCAGCGCG TTGCTACAAA AGGATAAAGG GGCCGCCCTA CACGAGGGAG
GAGTACATCC ACGGAGCGCC CATGATCCAG ATACCGAAAT TCGACATGGG GACCACAAGC
GCCGCCGCCA GGGCGGCCTT CCCCCTCGTG GCTAAGCTGG TGGTCCAGGA GAGGGGGCAG
ATCAGGATGC AGGCCCTCGA GGCCGCTAGA CAGATGGCGT ATAAATACCT CTCGAAGTAC
GTCGGCGACG CCAACTACTA CCTCAGGCTA GAGGCGGTTC CCCACCACGT GCTGAGGGAA
AACAGGATGT TGGCCATGGC CGGCGCGGAC CGTCTACAGG AGGGGATGAG GCTCGCCTTC
GGCTCCCCCG CGGGCAGAGC CGCGAGGGTC GAGGCCGGGC AGGTGATCTT CTACGCCGAG
TTTAAACCCG AGCACGTAGC CCACATGAAG GAGGCGCTTA GGCGCGCGTC TACCAAGCTG
CCGCTTCCAA CACGTATAGT CATTGAGGCA AAGGGCGATG GAGGCGGTAA AGCAGCTACA
CAGGGATAG
|
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| Protein sequence | MPVRPARCYK RIKGPPYTRE EYIHGAPMIQ IPKFDMGTTS AAARAAFPLV AKLVVQERGQ
IRMQALEAAR QMAYKYLSKY VGDANYYLRL EAVPHHVLRE NRMLAMAGAD RLQEGMRLAF
GSPAGRAARV EAGQVIFYAE FKPEHVAHMK EALRRASTKL PLPTRIVIEA KGDGGGKAAT
QG
|
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