| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0897 |
|---|
| Symbol | |
|---|
| ID | 6164287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 795282 |
|---|
| End bp | 795857 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641668053 |
|---|
| Product | DNA-directed RNA polymerase subunit E' |
|---|
| Protein accession | YP_001794280 |
|---|
| Protein GI | 171185361 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1095] DNA-directed RNA polymerase, subunit E' |
|---|
| TIGRFAM ID | [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.762651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.613497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTTTA GAGTGGTGGA GGCCGAGGAC TACGTCAGGA TACCCCCCGC CGACTTCGGC
AAGCCTCTGG AGGACATAGC TTTGCAGCAG CTGAAGGCGA GGTACGAGGG GAGGGTCCTT
AGGGAGGTGG GCTACGTCGT TGCGGTGCTC ACGGCGAAGG TCAGCAGAGA GGGGAAGATA
GTGTTCGGCG ACGGGGGGAC CTACCACAAG GCCCTCTTCA CTATGCTGGC CTACATGCCC
CTAGACGGCG AGATAGTGGA GGGGGTGGTG GAAAACGTCA GAGAGATGGG CATGTTGGTG
AGGATCGGGC CGGTGCTCGG CTTCATAAAC AAGATACACG TCATGGACGA GCCGAATATA
CTCTTCGACG CGAGCACCAA GAGCTACATC GGGGAGAGGA CCAAGAGGAG GGTGGGGGTG
GGGGACGTGG TGAGGGCCCG CATCACCGGC GTCAGCTTCA CAACGCCGAG GGAGGGGACC
GACCTCCTAC TCCGCGTCAC ATTGACAATG CGTATGCCGG GCCTCGGCAA GCTCGAGTGG
GTTAAGGAGA AGAAGCCGGC GGCGAAGAAG GCATGA
|
|---|
| Protein sequence | MPFRVVEAED YVRIPPADFG KPLEDIALQQ LKARYEGRVL REVGYVVAVL TAKVSREGKI
VFGDGGTYHK ALFTMLAYMP LDGEIVEGVV ENVREMGMLV RIGPVLGFIN KIHVMDEPNI
LFDASTKSYI GERTKRRVGV GDVVRARITG VSFTTPREGT DLLLRVTLTM RMPGLGKLEW
VKEKKPAAKK A
|
|---|
| |